Gene detail

Detail information of GWHGAAZE017518

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007023255.1	1.6271E-109	Adenine phosphoribosyl transferase 2 isoform 1 [Theobroma cacao]
Swissprot	tr\|Q9LFP0\|APT5_ARATH	3E-94	Adenine phosphoribosyltransferase 5
trEMBL	tr\|A0A061G9P7\|A0A061G9P7_THECC	6E-110	Adenine phosphoribosyl transferase 2 isoform 1 {ECO:0000313\|EMBL:EOY25877.1}
TAIR10	AT5G11160.1	2E-66	adenine phosphoribosyltransferase 5

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	7365949	7368897	+
GWHAAZE00000005	mRNA	7365949	7368897	+
GWHAAZE00000005	exon	7365949	7366027	+
GWHAAZE00000005	exon	7366246	7366341	+
GWHAAZE00000005	exon	7367279	7367371	+
GWHAAZE00000005	exon	7367656	7367805	+
GWHAAZE00000005	exon	7367911	7367969	+
GWHAAZE00000005	exon	7368727	7368897	+
GWHAAZE00000005	CDS	7365949	7366027	+
GWHAAZE00000005	CDS	7366246	7366341	+
GWHAAZE00000005	CDS	7367279	7367371	+
GWHAAZE00000005	CDS	7367656	7367805	+
GWHAAZE00000005	CDS	7367911	7367969	+
GWHAAZE00000005	CDS	7368727	7368897	+

Transcript Sequence
>GWHTAAZE017538 GAGAATGGGCTACAGGGAGACCCAAGGTTGAAAGCCATATCTGAAGCCATACGAGTCGTCCCTCACTTCCCCAAGCCAGACATAACAACGCTGTTATTGGATCACAAGACTTTCAAGGACACTGTTGATATCTTTGTCGATCGTTACAGAAACATGGGCATCTCTGTTGTTGCTGGAGTTGAGGCAAGAGGATTTATGTTTGGTCCTTCAATTGCTTTAGCCATTGGTGCAAAATTTGTTCCTCTACGTAAACCGAGAAAGTTGCCAGGAGAAGTTATCTCGGAAGCATATGTGCTCGAGTATGGTACTGATTGTTTGGAGATGCATGTTGAGGCTGTTCAACCTGGGGAACGTGCGTTGATCATTGATGATTTAGTGGCTACGGGTGGCACACTCTCTGCAGCCACAAGGCTTTTGGAACGGGCTGGGGCTGAGGTAGTTGAATGTGCCTGTGTTGTTGGGTTACCAGAGATCAAGAGCATACACAAGCTAAATGGAAAACCACCGCTATACGTGCTGGTGGAGCCTCGCCAATATGTTGCCTTGGTAATTGTTCCTGCTCTTAATGTTTGTGCGATTTCTTATTTGCTGTGGATGGTTGCACTATACTTCTGCCAAGTGTTTCACATTACTGTTCTCATTGCATAA

Network for GWHGAAZE017518

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00156.28	Pribosyltran	51	153	1.90E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00759	APRT, apt	Metabolic pathways	map01100
K00759	APRT, apt	Purine metabolism	map00230

Gene Ontology

GO term	Ontology	Name
GO:0009116	biological_process	nucleoside metabolic process
GO:0006168	biological_process	adenine salvage
GO:0005737	cellular_component	cytoplasm
GO:0003999	molecular_function	adenine phosphoribosyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	9.907
	SRR3591706	second leaf	16.354
	SRR3591707	mature leaf	1.190
	SRR3591708	Shoot apex	95.791
	SRR3591709	Stem	4.050
	SRR3591710	White floral bud	19.496
	SRR3591711	White flower	14.736
	SRR3591712	Green floral bud	62.398
	SRR3591713	Yellow flower	1.924
SRP173429	SRR8316895	Juvenile bud stage	3.712
	SRR8316896	Juvenile bud stage	11.398
	SRR8316897	Juvenile bud stage	9.794
	SRR8316894	Third green stage	16.937
	SRR8316900	Third green stage	66.439
	SRR8316901	Third green stage	65.324
	SRR8316898	Complete white stage	3.255
	SRR8316899	Complete white stage	21.117
	SRR8316903	Complete white stage	2.818
	SRR8316902	Silver flowering stage	0.891
	SRR8316904	Silver flowering stage	0.628
	SRR8316905	Silver flowering stage	0.258
	SRR8316906	Gold flowering stage	1.206
	SRR8316907	Gold flowering stage	1.143
	SRR8316908	Gold flowering stage	0.725
SRP132670	SRR6706286	Control	32.607
	SRR6706287	Light intensity 50%	42.705
	SRR6706288	Light intensity 20%	44.144
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	24.591
	CNS0095593	Slightly white alabastrum(diploid) 2	30.205
	CNS0095594	Slightly white alabastrum(diploid) 3	14.866
	CNS0095595	Whole white alabastrum(diploid) 2	19.450
	CNS0095596	Whole white alabastrum(diploid) 3	31.352
	CNS0095597	Whole white alabastrum(diploid) 4	7.271
	CNS0095598	Silvery flower (diploied) 1	9.490
	CNS0095599	Silvery flower (diploied) 2	9.990
	CNS0095600	Silvery flower (diploied) 3	6.446
	CNS0095601	Golden flower (diploid) 1	9.271
	CNS0095602	Golden flower (diploid) 2	6.106
	CNS0095603	Golden flower (diploid) 3	5.123
	CNS0095604	Slightly white alabastrum(tetraploid) 1	43.644
	CNS0095605	Slightly white alabastrum(tetraploid) 2	39.938
	CNS0095606	Slightly white alabastrum(tetraploid) 3	77.287
	CNS0095607	Whole white alabastrum(tetraploid) 1	12.647
	CNS0095608	Whole white alabastrum(tetraploid) 2	9.047
	CNS0095609	Whole white alabastrum(tetraploid) 3	43.898
	CNS0095610	Silvery flower (tetraploid) 1	3.047
	CNS0095611	Silvery flower (tetraploid) 2	6.007
	CNS0095612	Silvery flower (tetraploid) 3	2.393
	CNS0095613	Golden flower (tetraploid) 1	1.451
	CNS0095614	Golden flower (tetraploid) 2	2.004
	CNS0095615	Golden flower (tetraploid) 3	1.104
CRA001975	CRR073297	Stem 1	25.452
	CRR073298	Stem 2	36.442
	CRR073299	Stem 3	27.941
	CRR073300	Leaf 1	37.079
	CRR073301	Leaf 2	47.542
	CRR073302	Leaf 3	57.041
	CRR073303	Juvenile bud 1	12.964
	CRR073304	Juvenile bud 2	5.220
	CRR073305	Juvenile bud 3	12.105
	CRR073306	Third green 1	0.051
	CRR073307	Third green 2	0.144
	CRR073308	Third green 3	0.014
	CRR073309	Second white 1	0.566
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.059
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.153
	CRR073315	Gold flowering 1	3.080
	CRR073316	Gold flowering 2	2.214
	CRR073317	Gold flowering 3	3.024
	CRR073318	Tawny withering 1	12.775
	CRR073319	Tawny withering 2	4.623
	CRR073320	Tawny withering 3	20.902