Gene detail

Detail information of GWHGAAZE017424

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_011080863.1	PREDICTED: heat shock 70 kDa protein 14-like [Sesamum indicum]
Swissprot	tr\|F4HQD4\|HSP7P_ARATH	Heat shock 70 kDa protein 15
trEMBL	tr\|A0A068TRS5\|A0A068TRS5_COFCA	Coffea canephora DH200=94 genomic scaffold, scaffold_2 {ECO:0000313\|EMBL:CDO98063.1}
TAIR10	AT1G79920.1	Heat shock protein 70 (Hsp 70) family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	6055778	6061131	+
GWHAAZE00000005	mRNA	6055778	6061131	+
GWHAAZE00000005	exon	6055778	6056947	+
GWHAAZE00000005	exon	6057619	6057846	+
GWHAAZE00000005	exon	6057948	6058043	+
GWHAAZE00000005	exon	6058146	6058356	+
GWHAAZE00000005	exon	6059583	6059797	+
GWHAAZE00000005	exon	6059877	6060023	+
GWHAAZE00000005	exon	6060107	6060256	+
GWHAAZE00000005	exon	6060368	6060498	+
GWHAAZE00000005	exon	6060872	6061131	+
GWHAAZE00000005	CDS	6055778	6056947	+
GWHAAZE00000005	CDS	6057619	6057846	+
GWHAAZE00000005	CDS	6057948	6058043	+
GWHAAZE00000005	CDS	6058146	6058356	+
GWHAAZE00000005	CDS	6059583	6059797	+
GWHAAZE00000005	CDS	6059877	6060023	+
GWHAAZE00000005	CDS	6060107	6060256	+
GWHAAZE00000005	CDS	6060368	6060498	+
GWHAAZE00000005	CDS	6060872	6061085	+
GWHAAZE00000005	three_prime_UTR	6061086	6061131	+

Transcript Sequence
>GWHTAAZE017444 ATGAGTGTGGTTGGTTTTGATTTTGGCAATGAGAGTGGTGTCGTTGCAGTTGCAAGACAAAGAGGAATTGACGTCGTACTCAATGACGAGTCAAAACGAGAGACTCCGGCTCTTGTATGCTTCGGTGACAAGCAGCGGTTCCTTGGAACTGCTGGTGCTGCTTCAAGTATGATGAATCCAAAGAATACAATTTCTCAGATTAAGCGTTTGATTGGACGCCAGTTCTCAGACCCCGAGCTACAAAAGGATATCAAGGCACTGCCTTTTGCGGTGACCGAAGGGCCTGATGGATATCCATTGATTCATGCGAGGTATTTGGGAGAGATGAGAACCTTTACACCAACCCAAGTTTTGGGAATGGTGTTTTCTGACTTGAAAAGCATAGCAGAGAAAAATCTTAATGCAGCAGTGGTTGATTGCTGTATTGGGATACCTATTTATTTCACTGATCTCCAAAGGAGAGCTGTTATAGATGCAGCTACAATTGCCGGCTTGCACCCTCTTCGTTTGATGCATGAAACCACTGCAACTGCTCTTGCATATGGGATTTATAGGACGGATCTCCCTGAGAATGACCAGATCAATGTTGCTTTTGTTGATGTTGGGCATTCCAGTATGCAAGTTTGCATCGCTGGATTGAAGAAGGGTCAGTTGAAGATATTAGCTCATGCATTTGACAGATCTCTAGGTGGAAGAGATTTTGACGAGGCTCTCTTCCAGCACTTCGCTGCAAAATTTAAAGTAGAATACAAGATTGATGTGTATCAGAATGCAAGGGCTTGCCTCAGGCTTCGTGCTGGTTGTGAAAAGTTGAAGAAGGTCCTCAGTGCAAATCCAGAGGCACCTTTGAATATAGAGTGCTTGATGGACGAGAAGGATGTTAGAGGTTTTATTAAGAGAGATGAGTTTGAACAAATTAGCATACCAATTTTGGAGCGTGTGAAGAAGCCACTTGAGAAGGCTATATCAGAGGCTGGGCTTACGGTTGATAATATTTACTCAGTTGAGGTTGTTGGCTCAGGCTCTCGGGTTCCTGCCATTATCAGGATACTGACAGATTTTTTTGGCAAGGAGCCTAGGCGTACAATGAATGCAAGTGAGTGTGTTGCTAAAGGCTGCGCTCTAGAATGTGCAATTCTTAGCCCGACATTTAAAGTGCGAGATTTCCAGGTTAATGAGAGCTTCCCCTTTCCCATTGCTTTGTCATGGAAAGGTGCTGCTCCAGATGCACAGAGTGGGGCTGCAGATAATCAACAAAGTACTGTTGTTTTCACCAAGGGAAACCCCATACCTAGTATTAAGGCTCTGACATTCTACAGGTCAGGCACATTCACAATAGATGTACAATATGCTGACTTGAGTGAATTGCAGGCACCTGCAAAGATCAGCACCTATACGATTGGTCCATTCCAATCCACAAAGAGTGAACGTGCAAAAGTGAAGGTGAAAGTTCGCCTAAATCTGCATGGTATTGTGTCAATTGAGTCAGCGACACTGTTGGAAGAGGAGGAAGTTGAAGTCCCAGTTGTAAAAGCTAAGGAAGGTAATAAGATGGATACAGATGAAGCTCCAAGTCAAGCTGGTGCTGCTCCTACCAACGAAACTGATGTAAATATGCAGGATGCTAACAAGACTGTTAGTGATGCTCCTGGGAGTGAGAATGGAGCTCCAGATTCTGCCCATATGGAAACAGATGTGAAGGTCACTAATTTTTTTGGCATGCAGGTTGAGGCTCCAAAGAAGAAGGTTAAAAAGACGAACATACCTGTAACTGAGTTGGTTTATGGAGGAATGGTACCTGCAGATGTGCAGAAAGCAGTAGAGAAGGAGTTTGAAATGGCCTTGCAGGACCGAGTTATGGAAGAAACAAAAGACAAGAAGAATGCTGTGGAGTCCTATGTTTATGACATGAGAAACAAGTTACATGACAAATATCAAGAGTTTGTTACTGAATCGGAGAGAGAAGACTTCACTGCTATACTTCAGAAGGTGGAAGATTGGTTGTATGAAGATGGAGAGGATGAAACCAAAGGCGTTTATATCACCAAGCTCGAGGAGCTCAAAAAGAGAGGTGATCCTATTGAGGAGCGGTACAGGGACCACTCAGAAAGAGGTGCTGTGATAAATCAACTTGCTTATTGCATTAATAGTTACAGAGAAGCTGTGATGTCAAATGATCCAAAGTTTGATCACATTGATGTAGCAGAGAAACAGAAGGTTTTAAATGAGTGCGTTGAAGCGGAGGCTTGGTTAAGAGAGAAGAAGCAGCAACAAGACACTCTTCCCAAACATGCCACTCCAGTCTTGCTGTCAGTTGATGTAAGGAGGAAGGCTGAAGCCGTTGACAGGATTTGCAGGCCGATAATGACGAAACCAAAGCCAGCCAAGCCAGCTACACCTGAAGCAGCTGCACAATCACCTACTCAAGGGAGTGAACCACATCCTCAGGGCGCAGATACCCACAACACCAGTGAGAAATCTACAGCTGCCAGCGAGGCTCCACCAGCTGGAGAGCCCATGGAGACTGAAAAATCCGACTCCACACCAGGTGCTACTGCATAAGTTGGCGGAATTGACCGCTATTGAAATGTTTTATCAAGGACAAAAT

Network for GWHGAAZE017424

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00012.21	HSP70	3	699	1.00E-157

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09489	HSPA4	Tight junction	map04530
K09489	HSPA4	Antigen processing and presentation	map04612

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	151.605
	SRR3591706	second leaf	66.825
	SRR3591707	mature leaf	58.099
	SRR3591708	Shoot apex	113.069
	SRR3591709	Stem	103.525
	SRR3591710	White floral bud	116.418
	SRR3591711	White flower	102.149
	SRR3591712	Green floral bud	158.737
	SRR3591713	Yellow flower	79.118
SRP173429	SRR8316895	Juvenile bud stage	92.132
	SRR8316896	Juvenile bud stage	154.090
	SRR8316897	Juvenile bud stage	72.592
	SRR8316894	Third green stage	63.657
	SRR8316900	Third green stage	210.477
	SRR8316901	Third green stage	187.398
	SRR8316898	Complete white stage	72.070
	SRR8316899	Complete white stage	214.733
	SRR8316903	Complete white stage	114.738
	SRR8316902	Silver flowering stage	70.915
	SRR8316904	Silver flowering stage	104.029
	SRR8316905	Silver flowering stage	53.300
	SRR8316906	Gold flowering stage	161.305
	SRR8316907	Gold flowering stage	145.008
	SRR8316908	Gold flowering stage	138.720
SRP132670	SRR6706286	Control	153.900
	SRR6706287	Light intensity 50%	169.636
	SRR6706288	Light intensity 20%	182.267
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	83.269
	CNS0095593	Slightly white alabastrum(diploid) 2	98.974
	CNS0095594	Slightly white alabastrum(diploid) 3	82.194
	CNS0095595	Whole white alabastrum(diploid) 2	100.063
	CNS0095596	Whole white alabastrum(diploid) 3	93.334
	CNS0095597	Whole white alabastrum(diploid) 4	96.672
	CNS0095598	Silvery flower (diploied) 1	89.163
	CNS0095599	Silvery flower (diploied) 2	113.464
	CNS0095600	Silvery flower (diploied) 3	193.024
	CNS0095601	Golden flower (diploid) 1	120.866
	CNS0095602	Golden flower (diploid) 2	172.106
	CNS0095603	Golden flower (diploid) 3	170.427
	CNS0095604	Slightly white alabastrum(tetraploid) 1	119.609
	CNS0095605	Slightly white alabastrum(tetraploid) 2	95.474
	CNS0095606	Slightly white alabastrum(tetraploid) 3	213.270
	CNS0095607	Whole white alabastrum(tetraploid) 1	83.030
	CNS0095608	Whole white alabastrum(tetraploid) 2	75.995
	CNS0095609	Whole white alabastrum(tetraploid) 3	166.880
	CNS0095610	Silvery flower (tetraploid) 1	122.092
	CNS0095611	Silvery flower (tetraploid) 2	158.130
	CNS0095612	Silvery flower (tetraploid) 3	112.153
	CNS0095613	Golden flower (tetraploid) 1	78.625
	CNS0095614	Golden flower (tetraploid) 2	116.538
	CNS0095615	Golden flower (tetraploid) 3	85.574
CRA001975	CRR073297	Stem 1	152.202
	CRR073298	Stem 2	151.304
	CRR073299	Stem 3	134.161
	CRR073300	Leaf 1	183.182
	CRR073301	Leaf 2	160.463
	CRR073302	Leaf 3	148.658
	CRR073303	Juvenile bud 1	169.388
	CRR073304	Juvenile bud 2	128.569
	CRR073305	Juvenile bud 3	201.462
	CRR073306	Third green 1	76.571
	CRR073307	Third green 2	61.405
	CRR073308	Third green 3	71.502
	CRR073309	Second white 1	72.687
	CRR073310	Second white 2	62.503
	CRR073311	Second white 3	67.342
	CRR073312	Silver flowering 1	46.898
	CRR073313	Silver flowering 2	52.491
	CRR073314	Silver flowering 3	38.717
	CRR073315	Gold flowering 1	51.406
	CRR073316	Gold flowering 2	62.161
	CRR073317	Gold flowering 3	49.652
	CRR073318	Tawny withering 1	122.077
	CRR073319	Tawny withering 2	89.090
	CRR073320	Tawny withering 3	129.674