Detail information of GWHGAAZE017398


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011072385.10PREDICTED: malonate--CoA ligase isoform X1 [Sesamum indicum]
Swissprottr|Q8H151|AAE13_ARATH0Malonate--CoA ligase
trEMBLtr|A0A067KMD8|A0A067KMD8_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP37257.1}
TAIR10AT3G16170.11E-178AMP-dependent synthetase and ligase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene57203295727926-
GWHAAZE00000005mRNA57203295727926-
GWHAAZE00000005exon57203295720376-
GWHAAZE00000005exon57205945720647-
GWHAAZE00000005exon57207625720941-
GWHAAZE00000005exon57211255721147-
GWHAAZE00000005exon57212895721379-
GWHAAZE00000005exon57249425725046-
GWHAAZE00000005exon57252195725296-
GWHAAZE00000005exon57254215725513-
GWHAAZE00000005exon57256725725770-
GWHAAZE00000005exon57261045726211-
GWHAAZE00000005exon57268595726977-
GWHAAZE00000005exon57270805727278-
GWHAAZE00000005exon57277325727926-
GWHAAZE00000005CDS57277325727926-
GWHAAZE00000005CDS57270805727278-
GWHAAZE00000005CDS57268595726977-
GWHAAZE00000005CDS57261045726211-
GWHAAZE00000005CDS57256725725770-
GWHAAZE00000005CDS57254215725513-
GWHAAZE00000005CDS57252195725296-
GWHAAZE00000005CDS57249425725046-
GWHAAZE00000005CDS57212895721379-
GWHAAZE00000005CDS57211255721147-
GWHAAZE00000005CDS57207625720941-
GWHAAZE00000005CDS57205945720647-
GWHAAZE00000005CDS57203295720376-
Transcript Sequence

Network for GWHGAAZE017398

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00501.29AMP-binding91642.90E-29
PF00501.29AMP-binding2013651.20E-40
PF13193.7AMP-binding_C3684481.70E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18660ACSF3 Metabolic pathways map01100
Fatty acid metabolismmap01212
Fatty acid biosynthesismap00061
Valine, leucine and isoleucine degradationmap00280

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf38.430
SRR3591706second leaf122.758
SRR3591707mature leaf22.873
SRR3591708Shoot apex98.698
SRR3591709Stem13.759
SRR3591710White floral bud24.439
SRR3591711White flower10.997
SRR3591712Green floral bud55.256
SRR3591713Yellow flower3.537
SRP173429 SRR8316895Juvenile bud stage 38.108
SRR8316896Juvenile bud stage 49.943
SRR8316897Juvenile bud stage 20.318
SRR8316894Third green stage 19.333
SRR8316900Third green stage 71.151
SRR8316901Third green stage 60.250
SRR8316898Complete white stage 17.835
SRR8316899Complete white stage 60.332
SRR8316903Complete white stage 24.182
SRR8316902Silver flowering stage4.901
SRR8316904Silver flowering stage5.349
SRR8316905Silver flowering stage2.367
SRR8316906Gold flowering stage 5.538
SRR8316907Gold flowering stage 6.929
SRR8316908Gold flowering stage 8.267
SRP132670SRR6706286Control55.715
SRR6706287Light intensity 50%63.809
SRR6706288Light intensity 20%71.310
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.935
CNS0095593Slightly white alabastrum(diploid) 231.053
CNS0095594Slightly white alabastrum(diploid) 330.080
CNS0095595Whole white alabastrum(diploid) 225.250
CNS0095596Whole white alabastrum(diploid) 325.288
CNS0095597Whole white alabastrum(diploid) 418.728
CNS0095598Silvery flower (diploied) 117.517
CNS0095599Silvery flower (diploied) 216.954
CNS0095600Silvery flower (diploied) 310.154
CNS0095601Golden flower (diploid) 113.267
CNS0095602Golden flower (diploid) 29.094
CNS0095603Golden flower (diploid) 38.730
CNS0095604Slightly white alabastrum(tetraploid) 138.691
CNS0095605Slightly white alabastrum(tetraploid) 226.771
CNS0095606Slightly white alabastrum(tetraploid) 386.346
CNS0095607Whole white alabastrum(tetraploid) 117.742
CNS0095608Whole white alabastrum(tetraploid) 217.415
CNS0095609Whole white alabastrum(tetraploid) 351.042
CNS0095610Silvery flower (tetraploid) 17.584
CNS0095611Silvery flower (tetraploid) 27.704
CNS0095612Silvery flower (tetraploid) 36.436
CNS0095613Golden flower (tetraploid) 12.895
CNS0095614Golden flower (tetraploid) 25.969
CNS0095615Golden flower (tetraploid) 31.365
CRA001975CRR073297Stem 158.557
CRR073298Stem 255.228
CRR073299Stem 340.032
CRR073300Leaf 172.186
CRR073301Leaf 265.068
CRR073302Leaf 363.117
CRR073303Juvenile bud 148.453
CRR073304Juvenile bud 247.413
CRR073305Juvenile bud 351.938
CRR073306Third green 15.970
CRR073307Third green 25.002
CRR073308Third green 36.983
CRR073309Second white 12.516
CRR073310Second white 23.430
CRR073311Second white 31.865
CRR073312Silver flowering 12.951
CRR073313Silver flowering 23.085
CRR073314Silver flowering 31.745
CRR073315Gold flowering 124.769
CRR073316Gold flowering 233.082
CRR073317Gold flowering 322.955
CRR073318Tawny withering 19.843
CRR073319Tawny withering 27.202
CRR073320Tawny withering 39.150