Detail information of GWHGAAZE017344


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002527425.13.04479E-92Phosphoethanolamine/phosphocholine phosphatase, putative [Ricinus communis]
Swissprottr|Q9FZ62|PPSP2_ARATH4E-84Inorganic pyrophosphatase 2
trEMBLtr|B9SN56|B9SN56_RICCO1E-92Phosphoethanolamine/phosphocholine phosphatase, putative {ECO:0000313|EMBL:EEF34991.1}
TAIR10AT1G17710.13E-65Pyridoxal phosphate phosphatase-related protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene47881724789019-
GWHAAZE00000005mRNA47881724789019-
GWHAAZE00000005exon47881724788478-
GWHAAZE00000005exon47885444788704-
GWHAAZE00000005exon47888824789019-
GWHAAZE00000005CDS47888824789019-
GWHAAZE00000005CDS47885444788704-
GWHAAZE00000005CDS47881724788478-
Transcript Sequence

Network for GWHGAAZE017344

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06888.13Put_Phosphatase41701.50E-56
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13248PHOSPHO2 Metabolic pathways map01100
Vitamin B6 metabolismmap00750

Gene Ontology

GO term OntologyName
GO:0016791molecular_functionphosphatase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.402
SRR3591706second leaf3.753
SRR3591707mature leaf17.615
SRR3591708Shoot apex2.046
SRR3591709Stem8.257
SRR3591710White floral bud19.888
SRR3591711White flower45.124
SRR3591712Green floral bud8.661
SRR3591713Yellow flower24.438
SRP173429 SRR8316895Juvenile bud stage 2.177
SRR8316896Juvenile bud stage 5.694
SRR8316897Juvenile bud stage 1.578
SRR8316894Third green stage 9.312
SRR8316900Third green stage 13.979
SRR8316901Third green stage 41.840
SRR8316898Complete white stage 17.455
SRR8316899Complete white stage 14.193
SRR8316903Complete white stage 27.938
SRR8316902Silver flowering stage73.436
SRR8316904Silver flowering stage122.676
SRR8316905Silver flowering stage42.614
SRR8316906Gold flowering stage 20.333
SRR8316907Gold flowering stage 104.891
SRR8316908Gold flowering stage 66.824
SRP132670SRR6706286Control10.225
SRR6706287Light intensity 50%23.631
SRR6706288Light intensity 20%12.153
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.604
CNS0095593Slightly white alabastrum(diploid) 229.978
CNS0095594Slightly white alabastrum(diploid) 326.405
CNS0095595Whole white alabastrum(diploid) 212.248
CNS0095596Whole white alabastrum(diploid) 319.747
CNS0095597Whole white alabastrum(diploid) 426.143
CNS0095598Silvery flower (diploied) 113.291
CNS0095599Silvery flower (diploied) 29.418
CNS0095600Silvery flower (diploied) 35.196
CNS0095601Golden flower (diploid) 13.144
CNS0095602Golden flower (diploid) 24.070
CNS0095603Golden flower (diploid) 32.744
CNS0095604Slightly white alabastrum(tetraploid) 18.128
CNS0095605Slightly white alabastrum(tetraploid) 215.016
CNS0095606Slightly white alabastrum(tetraploid) 37.695
CNS0095607Whole white alabastrum(tetraploid) 113.997
CNS0095608Whole white alabastrum(tetraploid) 28.575
CNS0095609Whole white alabastrum(tetraploid) 314.227
CNS0095610Silvery flower (tetraploid) 118.739
CNS0095611Silvery flower (tetraploid) 23.382
CNS0095612Silvery flower (tetraploid) 36.061
CNS0095613Golden flower (tetraploid) 18.417
CNS0095614Golden flower (tetraploid) 25.291
CNS0095615Golden flower (tetraploid) 38.892
CRA001975CRR073297Stem 10.764
CRR073298Stem 20.539
CRR073299Stem 31.671
CRR073300Leaf 16.953
CRR073301Leaf 26.142
CRR073302Leaf 36.603
CRR073303Juvenile bud 12.806
CRR073304Juvenile bud 26.501
CRR073305Juvenile bud 33.411
CRR073306Third green 141.416
CRR073307Third green 229.912
CRR073308Third green 325.780
CRR073309Second white 160.834
CRR073310Second white 232.039
CRR073311Second white 325.906
CRR073312Silver flowering 122.443
CRR073313Silver flowering 28.969
CRR073314Silver flowering 311.385
CRR073315Gold flowering 114.449
CRR073316Gold flowering 215.949
CRR073317Gold flowering 312.689
CRR073318Tawny withering 123.458
CRR073319Tawny withering 232.546
CRR073320Tawny withering 323.849