Detail information of GWHGAAZE017292


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP40732.10hypothetical protein JCGZ_24731 [Jatropha curcas]
trEMBLtr|A0A067KX91|A0A067KX91_JATCU0Midasin {ECO:0000256|PIRNR:PIRNR010340}
TAIR10AT1G67120.10ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene39540874005433-
GWHAAZE00000005mRNA39540874005433-
GWHAAZE00000005exon40053294005433-
GWHAAZE00000005exon40048884005231-
GWHAAZE00000005exon40042514004335-
GWHAAZE00000005exon40038124004086-
GWHAAZE00000005exon40026724002841-
GWHAAZE00000005exon39988953999004-
GWHAAZE00000005exon39986863998805-
GWHAAZE00000005exon39981693998247-
GWHAAZE00000005exon39975313997653-
GWHAAZE00000005exon39973803997452-
GWHAAZE00000005exon39971953997291-
GWHAAZE00000005exon39969473997081-
GWHAAZE00000005exon39968033996859-
GWHAAZE00000005exon39965353996711-
GWHAAZE00000005exon39963093996434-
GWHAAZE00000005exon39944703996221-
GWHAAZE00000005exon39941213994188-
GWHAAZE00000005exon39938383994033-
GWHAAZE00000005exon39936293993733-
GWHAAZE00000005exon39932243993529-
GWHAAZE00000005exon39917613991954-
GWHAAZE00000005exon39916233991677-
GWHAAZE00000005exon39906733990805-
GWHAAZE00000005exon39899113989984-
GWHAAZE00000005exon39887313988851-
GWHAAZE00000005exon39870943987192-
GWHAAZE00000005exon39868773986977-
GWHAAZE00000005exon39866983986787-
GWHAAZE00000005exon39865333986613-
GWHAAZE00000005exon39862553986419-
GWHAAZE00000005exon39859383986145-
GWHAAZE00000005exon39849433985838-
GWHAAZE00000005exon39833233984840-
GWHAAZE00000005exon39829863983112-
GWHAAZE00000005exon39828153982874-
GWHAAZE00000005exon39824643982546-
GWHAAZE00000005exon39821343982385-
GWHAAZE00000005exon39815893981724-
GWHAAZE00000005exon39814223981507-
GWHAAZE00000005exon39812353981320-
GWHAAZE00000005exon39806393980780-
GWHAAZE00000005exon39804593980548-
GWHAAZE00000005exon39747173974843-
GWHAAZE00000005exon39744313974585-
GWHAAZE00000005exon39739823974095-
GWHAAZE00000005exon39726163972765-
GWHAAZE00000005exon39722383972417-
GWHAAZE00000005exon39719013972095-
GWHAAZE00000005exon39716423971743-
GWHAAZE00000005exon39711013971220-
GWHAAZE00000005exon39635763963657-
GWHAAZE00000005exon39633553963485-
GWHAAZE00000005exon39631023963266-
GWHAAZE00000005exon39627333962808-
GWHAAZE00000005exon39625393962651-
GWHAAZE00000005exon39621723962251-
GWHAAZE00000005exon39619703962083-
GWHAAZE00000005exon39616623961739-
GWHAAZE00000005exon39614223961578-
GWHAAZE00000005exon39601823960345-
GWHAAZE00000005exon39599893960095-
GWHAAZE00000005exon39596503959882-
GWHAAZE00000005exon39591733959406-
GWHAAZE00000005exon39588093959030-
GWHAAZE00000005exon39585503958708-
GWHAAZE00000005exon39582463958470-
GWHAAZE00000005exon39578543958162-
GWHAAZE00000005exon39576273957761-
GWHAAZE00000005exon39573393957539-
GWHAAZE00000005exon39554533957234-
GWHAAZE00000005exon39550903955371-
GWHAAZE00000005exon39548153954994-
GWHAAZE00000005exon39546073954705-
GWHAAZE00000005exon39543563954481-
GWHAAZE00000005exon39540873954170-
GWHAAZE00000005CDS40053294005433-
GWHAAZE00000005CDS40048884005231-
GWHAAZE00000005CDS40042514004335-
GWHAAZE00000005CDS40038124004086-
GWHAAZE00000005CDS40026724002841-
GWHAAZE00000005CDS39988953999004-
GWHAAZE00000005CDS39986863998805-
GWHAAZE00000005CDS39981693998247-
GWHAAZE00000005CDS39975313997653-
GWHAAZE00000005CDS39973803997452-
GWHAAZE00000005CDS39971953997291-
GWHAAZE00000005CDS39969473997081-
GWHAAZE00000005CDS39968033996859-
GWHAAZE00000005CDS39965353996711-
GWHAAZE00000005CDS39963093996434-
GWHAAZE00000005CDS39944703996221-
GWHAAZE00000005CDS39941213994188-
GWHAAZE00000005CDS39938383994033-
GWHAAZE00000005CDS39936293993733-
GWHAAZE00000005CDS39932243993529-
GWHAAZE00000005CDS39917613991954-
GWHAAZE00000005CDS39916233991677-
GWHAAZE00000005CDS39906733990805-
GWHAAZE00000005CDS39899113989984-
GWHAAZE00000005CDS39887313988851-
GWHAAZE00000005CDS39870943987192-
GWHAAZE00000005CDS39868773986977-
GWHAAZE00000005CDS39866983986787-
GWHAAZE00000005CDS39865333986613-
GWHAAZE00000005CDS39862553986419-
GWHAAZE00000005CDS39859383986145-
GWHAAZE00000005CDS39849433985838-
GWHAAZE00000005CDS39833233984840-
GWHAAZE00000005CDS39829863983112-
GWHAAZE00000005CDS39828153982874-
GWHAAZE00000005CDS39824643982546-
GWHAAZE00000005CDS39821343982385-
GWHAAZE00000005CDS39815893981724-
GWHAAZE00000005CDS39814223981507-
GWHAAZE00000005CDS39812353981320-
GWHAAZE00000005CDS39806393980780-
GWHAAZE00000005CDS39804593980548-
GWHAAZE00000005CDS39747173974843-
GWHAAZE00000005CDS39744313974585-
GWHAAZE00000005CDS39739823974095-
GWHAAZE00000005CDS39726163972765-
GWHAAZE00000005CDS39722383972417-
GWHAAZE00000005CDS39719013972095-
GWHAAZE00000005CDS39716423971743-
GWHAAZE00000005CDS39711013971220-
GWHAAZE00000005CDS39635763963657-
GWHAAZE00000005CDS39633553963485-
GWHAAZE00000005CDS39631023963266-
GWHAAZE00000005CDS39627333962808-
GWHAAZE00000005CDS39625393962651-
GWHAAZE00000005CDS39621723962251-
GWHAAZE00000005CDS39619703962083-
GWHAAZE00000005CDS39616623961739-
GWHAAZE00000005CDS39614223961578-
GWHAAZE00000005CDS39601823960345-
GWHAAZE00000005CDS39599893960095-
GWHAAZE00000005CDS39596503959882-
GWHAAZE00000005CDS39591733959406-
GWHAAZE00000005CDS39588093959030-
GWHAAZE00000005CDS39585503958708-
GWHAAZE00000005CDS39582463958470-
GWHAAZE00000005CDS39578543958162-
GWHAAZE00000005CDS39576273957761-
GWHAAZE00000005CDS39573393957539-
GWHAAZE00000005CDS39554533957234-
GWHAAZE00000005CDS39550903955371-
GWHAAZE00000005CDS39548153954994-
GWHAAZE00000005CDS39546073954705-
GWHAAZE00000005CDS39543563954481-
GWHAAZE00000005CDS39540873954170-
Transcript Sequence

Network for GWHGAAZE017292

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07728.15AAA_53014194.30E-15
PF17867.2AAA_lid_74505541.00E-11
PF07728.15AAA_56216671.80E-06
PF07728.15AAA_57698562.70E-07
PF17865.2AAA_lid_58699718.60E-26
PF07728.15AAA_5102211582.60E-22
PF17867.2AAA_lid_7117012663.20E-13
PF07728.15AAA_5132213683.10E-05
PF07728.15AAA_5145015458.20E-14
PF07728.15AAA_5172618705.50E-11
PF17867.2AAA_lid_7188519805.40E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14572MDN1, REA1 Ribosome biogenesis in eukaryotes map03008

Gene Ontology

GO term OntologyName
GO:0000027biological_processribosomal large subunit assembly
GO:0005634cellular_componentnucleus
GO:0016887molecular_functionATPase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.209
SRR3591706second leaf1.376
SRR3591707mature leaf2.572
SRR3591708Shoot apex6.762
SRR3591709Stem4.676
SRR3591710White floral bud3.511
SRR3591711White flower9.698
SRR3591712Green floral bud4.492
SRR3591713Yellow flower3.423
SRP173429 SRR8316895Juvenile bud stage 4.451
SRR8316896Juvenile bud stage 6.542
SRR8316897Juvenile bud stage 3.055
SRR8316894Third green stage 2.955
SRR8316900Third green stage 4.668
SRR8316901Third green stage 4.227
SRR8316898Complete white stage 0.161
SRR8316899Complete white stage 1.681
SRR8316903Complete white stage 0.826
SRR8316902Silver flowering stage0.636
SRR8316904Silver flowering stage1.161
SRR8316905Silver flowering stage0.393
SRR8316906Gold flowering stage 2.185
SRR8316907Gold flowering stage 1.768
SRR8316908Gold flowering stage 2.209
SRP132670SRR6706286Control2.176
SRR6706287Light intensity 50%2.778
SRR6706288Light intensity 20%2.938
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.572
CNS0095593Slightly white alabastrum(diploid) 22.392
CNS0095594Slightly white alabastrum(diploid) 32.554
CNS0095595Whole white alabastrum(diploid) 22.102
CNS0095596Whole white alabastrum(diploid) 31.397
CNS0095597Whole white alabastrum(diploid) 41.857
CNS0095598Silvery flower (diploied) 13.990
CNS0095599Silvery flower (diploied) 22.454
CNS0095600Silvery flower (diploied) 32.864
CNS0095601Golden flower (diploid) 13.170
CNS0095602Golden flower (diploid) 23.861
CNS0095603Golden flower (diploid) 33.655
CNS0095604Slightly white alabastrum(tetraploid) 12.721
CNS0095605Slightly white alabastrum(tetraploid) 22.123
CNS0095606Slightly white alabastrum(tetraploid) 35.836
CNS0095607Whole white alabastrum(tetraploid) 11.336
CNS0095608Whole white alabastrum(tetraploid) 21.108
CNS0095609Whole white alabastrum(tetraploid) 33.184
CNS0095610Silvery flower (tetraploid) 14.139
CNS0095611Silvery flower (tetraploid) 24.136
CNS0095612Silvery flower (tetraploid) 32.300
CNS0095613Golden flower (tetraploid) 11.143
CNS0095614Golden flower (tetraploid) 22.273
CNS0095615Golden flower (tetraploid) 31.413
CRA001975CRR073297Stem 14.919
CRR073298Stem 24.437
CRR073299Stem 31.902
CRR073300Leaf 13.162
CRR073301Leaf 23.055
CRR073302Leaf 31.069
CRR073303Juvenile bud 11.617
CRR073304Juvenile bud 20.420
CRR073305Juvenile bud 32.109
CRR073306Third green 10.087
CRR073307Third green 20.080
CRR073308Third green 30.281
CRR073309Second white 10.205
CRR073310Second white 20.523
CRR073311Second white 30.417
CRR073312Silver flowering 10.306
CRR073313Silver flowering 20.347
CRR073314Silver flowering 30.319
CRR073315Gold flowering 10.646
CRR073316Gold flowering 20.966
CRR073317Gold flowering 30.149
CRR073318Tawny withering 12.242
CRR073319Tawny withering 22.531
CRR073320Tawny withering 31.890