Detail information of GWHGAAZE017127


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006452920.15.6581E-149hypothetical protein CICLE_v10007313mg [Citrus clementina]
Swissprottr|Q9SMZ4|AASS_ARATH1E-138Saccharopine dehydrogenase
trEMBLtr|V4UPG9|V4UPG9_9ROSI2E-149Uncharacterized protein {ECO:0000313|EMBL:ESR66160.1}
TAIR10AT4G33150.25E-122lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene9230749492311560+
GWHAAZE00000004mRNA9230749492311560+
GWHAAZE00000004exon9230749492307742+
GWHAAZE00000004exon9230782592307911+
GWHAAZE00000004exon9230800192308130+
GWHAAZE00000004exon9230866392308836+
GWHAAZE00000004exon9230898292309064+
GWHAAZE00000004exon9231024192310287+
GWHAAZE00000004exon9231058692310702+
GWHAAZE00000004exon9231111392311560+
GWHAAZE00000004CDS9230749492307742+
GWHAAZE00000004CDS9230782592307911+
GWHAAZE00000004CDS9230800192308130+
GWHAAZE00000004CDS9230866392308836+
GWHAAZE00000004CDS9230898292309064+
GWHAAZE00000004CDS9231024192310287+
GWHAAZE00000004CDS9231058692310702+
GWHAAZE00000004CDS9231111392311560+
Transcript Sequence

Network for GWHGAAZE017127

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05222.16AlaDh_PNT_N81443.20E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14157AASS Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Lysine degradationmap00310

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.040
SRR3591706second leaf2.521
SRR3591707mature leaf2.128
SRR3591708Shoot apex3.971
SRR3591709Stem25.322
SRR3591710White floral bud45.344
SRR3591711White flower24.728
SRR3591712Green floral bud21.483
SRR3591713Yellow flower57.248
SRP173429 SRR8316895Juvenile bud stage 23.754
SRR8316896Juvenile bud stage 30.097
SRR8316897Juvenile bud stage 12.226
SRR8316894Third green stage 10.091
SRR8316900Third green stage 34.016
SRR8316901Third green stage 28.672
SRR8316898Complete white stage 43.934
SRR8316899Complete white stage 57.164
SRR8316903Complete white stage 87.756
SRR8316902Silver flowering stage18.851
SRR8316904Silver flowering stage32.589
SRR8316905Silver flowering stage14.554
SRR8316906Gold flowering stage 41.283
SRR8316907Gold flowering stage 27.613
SRR8316908Gold flowering stage 26.589
SRP132670SRR6706286Control44.917
SRR6706287Light intensity 50%48.975
SRR6706288Light intensity 20%52.555
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.344
CNS0095593Slightly white alabastrum(diploid) 23.247
CNS0095594Slightly white alabastrum(diploid) 37.067
CNS0095595Whole white alabastrum(diploid) 24.664
CNS0095596Whole white alabastrum(diploid) 36.175
CNS0095597Whole white alabastrum(diploid) 48.284
CNS0095598Silvery flower (diploied) 18.210
CNS0095599Silvery flower (diploied) 212.737
CNS0095600Silvery flower (diploied) 3200.361
CNS0095601Golden flower (diploid) 116.094
CNS0095602Golden flower (diploid) 2188.126
CNS0095603Golden flower (diploid) 3185.749
CNS0095604Slightly white alabastrum(tetraploid) 13.480
CNS0095605Slightly white alabastrum(tetraploid) 22.973
CNS0095606Slightly white alabastrum(tetraploid) 312.222
CNS0095607Whole white alabastrum(tetraploid) 12.907
CNS0095608Whole white alabastrum(tetraploid) 23.110
CNS0095609Whole white alabastrum(tetraploid) 328.916
CNS0095610Silvery flower (tetraploid) 199.903
CNS0095611Silvery flower (tetraploid) 2230.258
CNS0095612Silvery flower (tetraploid) 3168.960
CNS0095613Golden flower (tetraploid) 123.297
CNS0095614Golden flower (tetraploid) 280.288
CNS0095615Golden flower (tetraploid) 3298.481
CRA001975CRR073297Stem 134.084
CRR073298Stem 218.387
CRR073299Stem 323.993
CRR073300Leaf 133.944
CRR073301Leaf 218.385
CRR073302Leaf 326.290
CRR073303Juvenile bud 120.858
CRR073304Juvenile bud 243.619
CRR073305Juvenile bud 342.170
CRR073306Third green 132.261
CRR073307Third green 217.219
CRR073308Third green 328.065
CRR073309Second white 128.327
CRR073310Second white 232.218
CRR073311Second white 352.995
CRR073312Silver flowering 139.416
CRR073313Silver flowering 235.125
CRR073314Silver flowering 350.767
CRR073315Gold flowering 11.178
CRR073316Gold flowering 21.181
CRR073317Gold flowering 30.732
CRR073318Tawny withering 13.706
CRR073319Tawny withering 22.137
CRR073320Tawny withering 35.401