Detail information of GWHGAAZE016795


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO64326.19.43449E-36hypothetical protein CISIN_1g015160mg [Citrus sinensis]
trEMBLtr|A0A067FMB3|A0A067FMB3_CITSI4E-36Uncharacterized protein {ECO:0000313|EMBL:KDO64326.1}
TAIR10AT2G32170.12E-26S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8306612083066869-
GWHAAZE00000004mRNA8306612083066869-
GWHAAZE00000004exon8306612083066245-
GWHAAZE00000004exon8306633683066404-
GWHAAZE00000004exon8306649183066550-
GWHAAZE00000004exon8306680783066869-
GWHAAZE00000004CDS8306680783066869-
GWHAAZE00000004CDS8306649183066550-
GWHAAZE00000004CDS8306633683066404-
GWHAAZE00000004CDS8306612083066245-
Transcript Sequence

Network for GWHGAAZE016795

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07942.13N222716911.30E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19787CARNMT1 Metabolic pathways map01100
Histidine metabolismmap00340

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.904
SRR3591706second leaf7.753
SRR3591707mature leaf7.548
SRR3591708Shoot apex14.314
SRR3591709Stem14.829
SRR3591710White floral bud8.647
SRR3591711White flower9.446
SRR3591712Green floral bud10.867
SRR3591713Yellow flower6.448
SRP173429 SRR8316895Juvenile bud stage 8.750
SRR8316896Juvenile bud stage 17.252
SRR8316897Juvenile bud stage 6.790
SRR8316894Third green stage 6.415
SRR8316900Third green stage 11.062
SRR8316901Third green stage 9.945
SRR8316898Complete white stage 3.968
SRR8316899Complete white stage 16.245
SRR8316903Complete white stage 6.283
SRR8316902Silver flowering stage4.408
SRR8316904Silver flowering stage7.045
SRR8316905Silver flowering stage2.202
SRR8316906Gold flowering stage 8.792
SRR8316907Gold flowering stage 8.555
SRR8316908Gold flowering stage 8.829
SRP132670SRR6706286Control0.611
SRR6706287Light intensity 50%0.634
SRR6706288Light intensity 20%1.100
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.243
CNS0095593Slightly white alabastrum(diploid) 213.181
CNS0095594Slightly white alabastrum(diploid) 316.797
CNS0095595Whole white alabastrum(diploid) 212.459
CNS0095596Whole white alabastrum(diploid) 314.144
CNS0095597Whole white alabastrum(diploid) 410.214
CNS0095598Silvery flower (diploied) 111.670
CNS0095599Silvery flower (diploied) 213.413
CNS0095600Silvery flower (diploied) 37.476
CNS0095601Golden flower (diploid) 111.221
CNS0095602Golden flower (diploid) 26.471
CNS0095603Golden flower (diploid) 37.943
CNS0095604Slightly white alabastrum(tetraploid) 114.556
CNS0095605Slightly white alabastrum(tetraploid) 215.783
CNS0095606Slightly white alabastrum(tetraploid) 314.311
CNS0095607Whole white alabastrum(tetraploid) 113.185
CNS0095608Whole white alabastrum(tetraploid) 29.316
CNS0095609Whole white alabastrum(tetraploid) 310.140
CNS0095610Silvery flower (tetraploid) 111.380
CNS0095611Silvery flower (tetraploid) 210.823
CNS0095612Silvery flower (tetraploid) 313.166
CNS0095613Golden flower (tetraploid) 16.343
CNS0095614Golden flower (tetraploid) 27.516
CNS0095615Golden flower (tetraploid) 37.266
CRA001975CRR073297Stem 14.052
CRR073298Stem 22.863
CRR073299Stem 31.430
CRR073300Leaf 12.948
CRR073301Leaf 22.749
CRR073302Leaf 31.511
CRR073303Juvenile bud 11.274
CRR073304Juvenile bud 21.831
CRR073305Juvenile bud 32.123
CRR073306Third green 10.324
CRR073307Third green 20.106
CRR073308Third green 30.533
CRR073309Second white 10.672
CRR073310Second white 21.750
CRR073311Second white 30.758
CRR073312Silver flowering 10.045
CRR073313Silver flowering 20.138
CRR073314Silver flowering 30.028
CRR073315Gold flowering 12.805
CRR073316Gold flowering 23.551
CRR073317Gold flowering 31.114
CRR073318Tawny withering 12.919
CRR073319Tawny withering 25.440
CRR073320Tawny withering 35.994