Detail information of GWHGAAZE016711


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009602161.10PREDICTED: mitotic spindle checkpoint protein BUBR1 [Nicotiana tomentosiformis]
Swissprottr|O22806|BUBR1_ARATH2E-150Mitotic spindle checkpoint protein BUBR1
trEMBLtr|M1AMC9|M1AMC9_SOLTU3E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400025922}
TAIR10AT2G33560.24E-117BUB1-related (BUB1: budding uninhibited by benzymidazol 1)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8134225681345893-
GWHAAZE00000004mRNA8134225681345893-
GWHAAZE00000004exon8134566681345893-
GWHAAZE00000004exon8134546581345524-
GWHAAZE00000004exon8134479981344943-
GWHAAZE00000004exon8134421481344371-
GWHAAZE00000004exon8134327581343356-
GWHAAZE00000004exon8134310681343172-
GWHAAZE00000004exon8134296481343018-
GWHAAZE00000004exon8134247081342626-
GWHAAZE00000004exon8134225681342348-
GWHAAZE00000004five_prime_UTR8134586381345893-
GWHAAZE00000004CDS8134566681345862-
GWHAAZE00000004CDS8134546581345524-
GWHAAZE00000004CDS8134479981344943-
GWHAAZE00000004CDS8134421481344371-
GWHAAZE00000004CDS8134327581343356-
GWHAAZE00000004CDS8134310681343172-
GWHAAZE00000004CDS8134296481343018-
GWHAAZE00000004CDS8134247081342626-
GWHAAZE00000004CDS8134225681342348-
Transcript Sequence

Network for GWHGAAZE016711

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08311.13Mad3_BUB1_I651854.10E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02178BUB1 Cell cycle map04110
Cell cycle - yeastmap04111
Meiosis - yeastmap04113
Oocyte meiosismap04114
Progesterone-mediated oocyte maturationmap04914

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.554
SRR3591706second leaf3.303
SRR3591707mature leaf0.484
SRR3591708Shoot apex36.767
SRR3591709Stem3.849
SRR3591710White floral bud0.928
SRR3591711White flower0.674
SRR3591712Green floral bud1.018
SRR3591713Yellow flower0.151
SRP173429 SRR8316895Juvenile bud stage 5.422
SRR8316896Juvenile bud stage 3.546
SRR8316897Juvenile bud stage 2.713
SRR8316894Third green stage 0.914
SRR8316900Third green stage 1.098
SRR8316901Third green stage 0.916
SRR8316898Complete white stage 0.171
SRR8316899Complete white stage 0.291
SRR8316903Complete white stage 0.098
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.059
SRR8316906Gold flowering stage 0.075
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.145
SRP132670SRR6706286Control0.938
SRR6706287Light intensity 50%0.919
SRR6706288Light intensity 20%1.240
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.865
CNS0095593Slightly white alabastrum(diploid) 21.685
CNS0095594Slightly white alabastrum(diploid) 31.409
CNS0095595Whole white alabastrum(diploid) 20.870
CNS0095596Whole white alabastrum(diploid) 30.383
CNS0095597Whole white alabastrum(diploid) 40.580
CNS0095598Silvery flower (diploied) 13.075
CNS0095599Silvery flower (diploied) 22.062
CNS0095600Silvery flower (diploied) 30.625
CNS0095601Golden flower (diploid) 10.622
CNS0095602Golden flower (diploid) 20.564
CNS0095603Golden flower (diploid) 30.459
CNS0095604Slightly white alabastrum(tetraploid) 12.922
CNS0095605Slightly white alabastrum(tetraploid) 21.579
CNS0095606Slightly white alabastrum(tetraploid) 37.958
CNS0095607Whole white alabastrum(tetraploid) 12.256
CNS0095608Whole white alabastrum(tetraploid) 20.510
CNS0095609Whole white alabastrum(tetraploid) 30.811
CNS0095610Silvery flower (tetraploid) 10.197
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.074
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 15.355
CRR073298Stem 25.331
CRR073299Stem 36.770
CRR073300Leaf 10.881
CRR073301Leaf 20.696
CRR073302Leaf 30.643
CRR073303Juvenile bud 10.209
CRR073304Juvenile bud 20.054
CRR073305Juvenile bud 30.311
CRR073306Third green 10.000
CRR073307Third green 20.136
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.043
CRR073311Second white 30.125
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.512
CRR073316Gold flowering 20.361
CRR073317Gold flowering 30.340
CRR073318Tawny withering 17.947
CRR073319Tawny withering 27.734
CRR073320Tawny withering 310.764