Detail information of GWHGAAZE016489


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007017301.10Mov34/MPN/PAD-1 family protein [Theobroma cacao]
Swissprottr|Q9LT08|PSDE_ARATH026S proteasome non-ATPase regulatory subunit 14 homolog
trEMBLtr|A0A061FBV8|A0A061FBV8_THECC0Mov34/MPN/PAD-1 family protein {ECO:0000313|EMBL:EOY14526.1}
TAIR10AT5G23540.13E-161Mov34/MPN/PAD-1 family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7757702577580440-
GWHAAZE00000004mRNA7757702577580440-
GWHAAZE00000004exon7757702577577216-
GWHAAZE00000004exon7757801377578180-
GWHAAZE00000004exon7757826577578441-
GWHAAZE00000004exon7757915677579237-
GWHAAZE00000004exon7757959577579772-
GWHAAZE00000004exon7758029977580440-
GWHAAZE00000004CDS7758029977580440-
GWHAAZE00000004CDS7757959577579772-
GWHAAZE00000004CDS7757915677579237-
GWHAAZE00000004CDS7757826577578441-
GWHAAZE00000004CDS7757801377578180-
GWHAAZE00000004CDS7757702577577216-
Transcript Sequence

Network for GWHGAAZE016489

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01398.22JAB301412.40E-32
PF13012.7MitMem_reg1762984.10E-14
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyJAMM

KEGG pathway

KO Enzyme pathway mapID
K03030PSMD14, RPN11, POH1 Proteasome map03050

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf231.352
SRR3591706second leaf108.809
SRR3591707mature leaf89.698
SRR3591708Shoot apex168.521
SRR3591709Stem193.707
SRR3591710White floral bud245.048
SRR3591711White flower438.219
SRR3591712Green floral bud189.791
SRR3591713Yellow flower509.417
SRP173429 SRR8316895Juvenile bud stage 122.439
SRR8316896Juvenile bud stage 178.654
SRR8316897Juvenile bud stage 87.209
SRR8316894Third green stage 68.409
SRR8316900Third green stage 201.180
SRR8316901Third green stage 192.017
SRR8316898Complete white stage 129.221
SRR8316899Complete white stage 293.893
SRR8316903Complete white stage 176.399
SRR8316902Silver flowering stage179.610
SRR8316904Silver flowering stage212.390
SRR8316905Silver flowering stage119.812
SRR8316906Gold flowering stage 459.326
SRR8316907Gold flowering stage 416.839
SRR8316908Gold flowering stage 460.628
SRP132670SRR6706286Control154.740
SRR6706287Light intensity 50%163.323
SRR6706288Light intensity 20%177.148
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1157.053
CNS0095593Slightly white alabastrum(diploid) 2176.561
CNS0095594Slightly white alabastrum(diploid) 3173.492
CNS0095595Whole white alabastrum(diploid) 2150.718
CNS0095596Whole white alabastrum(diploid) 3140.783
CNS0095597Whole white alabastrum(diploid) 4145.815
CNS0095598Silvery flower (diploied) 1187.125
CNS0095599Silvery flower (diploied) 2199.707
CNS0095600Silvery flower (diploied) 3359.724
CNS0095601Golden flower (diploid) 1194.718
CNS0095602Golden flower (diploid) 2319.228
CNS0095603Golden flower (diploid) 3315.110
CNS0095604Slightly white alabastrum(tetraploid) 1171.638
CNS0095605Slightly white alabastrum(tetraploid) 2143.352
CNS0095606Slightly white alabastrum(tetraploid) 3229.549
CNS0095607Whole white alabastrum(tetraploid) 1115.416
CNS0095608Whole white alabastrum(tetraploid) 2112.349
CNS0095609Whole white alabastrum(tetraploid) 3195.832
CNS0095610Silvery flower (tetraploid) 1452.997
CNS0095611Silvery flower (tetraploid) 2466.935
CNS0095612Silvery flower (tetraploid) 3451.517
CNS0095613Golden flower (tetraploid) 1434.848
CNS0095614Golden flower (tetraploid) 2409.748
CNS0095615Golden flower (tetraploid) 3542.103
CRA001975CRR073297Stem 1180.183
CRR073298Stem 2192.813
CRR073299Stem 3217.239
CRR073300Leaf 1213.452
CRR073301Leaf 2210.453
CRR073302Leaf 3249.744
CRR073303Juvenile bud 1273.230
CRR073304Juvenile bud 2270.398
CRR073305Juvenile bud 3180.899
CRR073306Third green 1271.372
CRR073307Third green 2283.887
CRR073308Third green 3248.125
CRR073309Second white 1351.093
CRR073310Second white 2364.790
CRR073311Second white 3279.986
CRR073312Silver flowering 1244.618
CRR073313Silver flowering 2267.024
CRR073314Silver flowering 3228.565
CRR073315Gold flowering 1155.665
CRR073316Gold flowering 2180.401
CRR073317Gold flowering 3116.378
CRR073318Tawny withering 1210.457
CRR073319Tawny withering 2183.216
CRR073320Tawny withering 3212.174