Detail information of GWHGAAZE016055


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU29055.17.06947E-23hypothetical protein MIMGU_mgv1a019907mg [Erythranthe guttata]
trEMBLtr|A0A022QRE1|A0A022QRE1_ERYGU3E-23Uncharacterized protein {ECO:0000313|EMBL:EYU29055.1}
TAIR10AT5G41770.16E-15crooked neck protein, putative / cell cycle protein, putative

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene6798730367988181-
GWHAAZE00000004mRNA6798730367988181-
GWHAAZE00000004exon6798730367987372-
GWHAAZE00000004exon6798746467987497-
GWHAAZE00000004exon6798787067988009-
GWHAAZE00000004exon6798810267988181-
GWHAAZE00000004CDS6798810267988181-
GWHAAZE00000004CDS6798787067988009-
GWHAAZE00000004CDS6798746467987497-
GWHAAZE00000004CDS6798730367987372-
Transcript Sequence

Network for GWHGAAZE016055

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12869CRN, CRNKL1, CLF1, SYF3 Spliceosome map03040

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.727
SRR3591706second leaf1.621
SRR3591707mature leaf3.332
SRR3591708Shoot apex1.220
SRR3591709Stem1.754
SRR3591710White floral bud1.464
SRR3591711White flower1.999
SRR3591712Green floral bud1.965
SRR3591713Yellow flower0.551
SRP173429 SRR8316895Juvenile bud stage 0.659
SRR8316896Juvenile bud stage 1.935
SRR8316897Juvenile bud stage 0.140
SRR8316894Third green stage 0.751
SRR8316900Third green stage 0.474
SRR8316901Third green stage 0.717
SRR8316898Complete white stage 0.418
SRR8316899Complete white stage 0.636
SRR8316903Complete white stage 0.413
SRR8316902Silver flowering stage0.226
SRR8316904Silver flowering stage0.295
SRR8316905Silver flowering stage0.494
SRR8316906Gold flowering stage 0.468
SRR8316907Gold flowering stage 1.613
SRR8316908Gold flowering stage 1.725
SRP132670SRR6706286Control4.955
SRR6706287Light intensity 50%3.679
SRR6706288Light intensity 20%3.331
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.960
CNS0095593Slightly white alabastrum(diploid) 20.714
CNS0095594Slightly white alabastrum(diploid) 31.361
CNS0095595Whole white alabastrum(diploid) 20.837
CNS0095596Whole white alabastrum(diploid) 30.205
CNS0095597Whole white alabastrum(diploid) 40.530
CNS0095598Silvery flower (diploied) 12.047
CNS0095599Silvery flower (diploied) 20.820
CNS0095600Silvery flower (diploied) 30.955
CNS0095601Golden flower (diploid) 11.692
CNS0095602Golden flower (diploid) 20.240
CNS0095603Golden flower (diploid) 30.535
CNS0095604Slightly white alabastrum(tetraploid) 10.654
CNS0095605Slightly white alabastrum(tetraploid) 20.822
CNS0095606Slightly white alabastrum(tetraploid) 31.844
CNS0095607Whole white alabastrum(tetraploid) 11.225
CNS0095608Whole white alabastrum(tetraploid) 20.184
CNS0095609Whole white alabastrum(tetraploid) 30.394
CNS0095610Silvery flower (tetraploid) 10.603
CNS0095611Silvery flower (tetraploid) 20.407
CNS0095612Silvery flower (tetraploid) 30.076
CNS0095613Golden flower (tetraploid) 10.383
CNS0095614Golden flower (tetraploid) 20.736
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.715
CRR073298Stem 21.258
CRR073299Stem 30.221
CRR073300Leaf 10.186
CRR073301Leaf 20.901
CRR073302Leaf 30.536
CRR073303Juvenile bud 10.137
CRR073304Juvenile bud 20.113
CRR073305Juvenile bud 30.238
CRR073306Third green 10.243
CRR073307Third green 20.000
CRR073308Third green 30.457
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.296
CRR073316Gold flowering 20.828
CRR073317Gold flowering 30.633
CRR073318Tawny withering 12.383
CRR073319Tawny withering 20.375
CRR073320Tawny withering 30.439