Detail information of GWHGAAZE015914


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007019090.10Caffeic acid 3-O-methyltransferase 1 [Theobroma cacao]
Swissprottr|Q8W013|COMT1_CATRO9E-171Caffeic acid 3-O-methyltransferase
trEMBLtr|A0A061FG56|A0A061FG56_THECC0Caffeic acid 3-O-methyltransferase 1 {ECO:0000313|EMBL:EOY16315.1}
TAIR10AT5G54160.15E-128O-methyltransferase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene6286628962869885-
GWHAAZE00000004mRNA6286628962869885-
GWHAAZE00000004exon6286628962866585-
GWHAAZE00000004exon6286709462867158-
GWHAAZE00000004exon6286823462868544-
GWHAAZE00000004exon6286946162869885-
GWHAAZE00000004CDS6286946162869885-
GWHAAZE00000004CDS6286823462868544-
GWHAAZE00000004CDS6286709462867158-
GWHAAZE00000004CDS6286628962866585-
Transcript Sequence

Network for GWHGAAZE015914

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08100.12Dimerisation34851.50E-21
PF00891.19Methyltransf_21423472.00E-70
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13066E2.1.1.68, COMT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0008168molecular_functionmethyltransferase activity
GO:0046983molecular_functionprotein dimerization activity
GO:0008171molecular_functionO-methyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.526
SRR3591706second leaf30.810
SRR3591707mature leaf16.643
SRR3591708Shoot apex15.411
SRR3591709Stem16.227
SRR3591710White floral bud32.817
SRR3591711White flower30.309
SRR3591712Green floral bud16.371
SRR3591713Yellow flower21.651
SRP173429 SRR8316895Juvenile bud stage 12.081
SRR8316896Juvenile bud stage 22.847
SRR8316897Juvenile bud stage 7.323
SRR8316894Third green stage 6.258
SRR8316900Third green stage 17.937
SRR8316901Third green stage 21.879
SRR8316898Complete white stage 21.657
SRR8316899Complete white stage 34.070
SRR8316903Complete white stage 29.674
SRR8316902Silver flowering stage28.988
SRR8316904Silver flowering stage41.089
SRR8316905Silver flowering stage26.222
SRR8316906Gold flowering stage 81.492
SRR8316907Gold flowering stage 90.776
SRR8316908Gold flowering stage 103.730
SRP132670SRR6706286Control33.346
SRR6706287Light intensity 50%28.007
SRR6706288Light intensity 20%27.545
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.195
CNS0095593Slightly white alabastrum(diploid) 215.868
CNS0095594Slightly white alabastrum(diploid) 324.272
CNS0095595Whole white alabastrum(diploid) 216.058
CNS0095596Whole white alabastrum(diploid) 313.863
CNS0095597Whole white alabastrum(diploid) 416.429
CNS0095598Silvery flower (diploied) 127.039
CNS0095599Silvery flower (diploied) 224.114
CNS0095600Silvery flower (diploied) 335.823
CNS0095601Golden flower (diploid) 129.577
CNS0095602Golden flower (diploid) 232.045
CNS0095603Golden flower (diploid) 331.521
CNS0095604Slightly white alabastrum(tetraploid) 124.073
CNS0095605Slightly white alabastrum(tetraploid) 221.368
CNS0095606Slightly white alabastrum(tetraploid) 317.281
CNS0095607Whole white alabastrum(tetraploid) 120.635
CNS0095608Whole white alabastrum(tetraploid) 216.956
CNS0095609Whole white alabastrum(tetraploid) 319.453
CNS0095610Silvery flower (tetraploid) 127.415
CNS0095611Silvery flower (tetraploid) 223.256
CNS0095612Silvery flower (tetraploid) 346.115
CNS0095613Golden flower (tetraploid) 125.375
CNS0095614Golden flower (tetraploid) 220.750
CNS0095615Golden flower (tetraploid) 318.279
CRA001975CRR073297Stem 122.023
CRR073298Stem 221.234
CRR073299Stem 319.842
CRR073300Leaf 126.522
CRR073301Leaf 222.814
CRR073302Leaf 323.493
CRR073303Juvenile bud 135.905
CRR073304Juvenile bud 223.891
CRR073305Juvenile bud 332.668
CRR073306Third green 1100.804
CRR073307Third green 2100.920
CRR073308Third green 389.931
CRR073309Second white 184.867
CRR073310Second white 287.898
CRR073311Second white 388.731
CRR073312Silver flowering 189.061
CRR073313Silver flowering 294.803
CRR073314Silver flowering 3101.208
CRR073315Gold flowering 118.654
CRR073316Gold flowering 216.217
CRR073317Gold flowering 314.133
CRR073318Tawny withering 120.555
CRR073319Tawny withering 221.015
CRR073320Tawny withering 322.558