Detail information of GWHGAAZE015463


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007010305.15.7344E-123Zn-dependent exopeptidases superfamily protein isoform 1 [Theobroma cacao]
Swissprottr|Q8GUM5|NICA_ARATH3E-102Nicastrin (Precursor)
trEMBLtr|A0A061FP76|A0A061FP76_THECC2E-123Zn-dependent exopeptidases superfamily protein isoform 1 {ECO:0000313|EMBL:EOY19115.1}
TAIR10AT3G52640.21E-86Zn-dependent exopeptidases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene4124221941254870+
GWHAAZE00000004mRNA4124221941254870+
GWHAAZE00000004exon4124221941242234+
GWHAAZE00000004exon4124889841249017+
GWHAAZE00000004exon4124912141249235+
GWHAAZE00000004exon4125049741250581+
GWHAAZE00000004exon4125177541251915+
GWHAAZE00000004exon4125273741252826+
GWHAAZE00000004exon4125289041253494+
GWHAAZE00000004exon4125460641254870+
GWHAAZE00000004CDS4124221941242234+
GWHAAZE00000004CDS4124889841249017+
GWHAAZE00000004CDS4124912141249235+
GWHAAZE00000004CDS4125049741250581+
GWHAAZE00000004CDS4125177541251915+
GWHAAZE00000004CDS4125273741252826+
GWHAAZE00000004CDS4125289041253494+
GWHAAZE00000004CDS4125460641254870+
Transcript Sequence

Network for GWHGAAZE015463

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF18266.2Ncstrn_small31992.90E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06171NCSTN Notch signaling pathway map04330

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.027
SRR3591706second leaf0.888
SRR3591707mature leaf0.305
SRR3591708Shoot apex3.855
SRR3591709Stem1.883
SRR3591710White floral bud0.152
SRR3591711White flower0.192
SRR3591712Green floral bud0.185
SRR3591713Yellow flower0.115
SRP173429 SRR8316895Juvenile bud stage 1.278
SRR8316896Juvenile bud stage 1.314
SRR8316897Juvenile bud stage 0.579
SRR8316894Third green stage 0.989
SRR8316900Third green stage 2.265
SRR8316901Third green stage 2.042
SRR8316898Complete white stage 1.416
SRR8316899Complete white stage 3.155
SRR8316903Complete white stage 2.427
SRR8316902Silver flowering stage0.139
SRR8316904Silver flowering stage0.360
SRR8316905Silver flowering stage0.235
SRR8316906Gold flowering stage 0.028
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.255
SRP132670SRR6706286Control2.089
SRR6706287Light intensity 50%2.341
SRR6706288Light intensity 20%1.906
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.215
CNS0095593Slightly white alabastrum(diploid) 22.325
CNS0095594Slightly white alabastrum(diploid) 31.688
CNS0095595Whole white alabastrum(diploid) 21.010
CNS0095596Whole white alabastrum(diploid) 31.195
CNS0095597Whole white alabastrum(diploid) 40.714
CNS0095598Silvery flower (diploied) 10.847
CNS0095599Silvery flower (diploied) 20.574
CNS0095600Silvery flower (diploied) 30.249
CNS0095601Golden flower (diploid) 10.252
CNS0095602Golden flower (diploid) 20.089
CNS0095603Golden flower (diploid) 30.075
CNS0095604Slightly white alabastrum(tetraploid) 10.699
CNS0095605Slightly white alabastrum(tetraploid) 21.062
CNS0095606Slightly white alabastrum(tetraploid) 31.309
CNS0095607Whole white alabastrum(tetraploid) 10.419
CNS0095608Whole white alabastrum(tetraploid) 20.511
CNS0095609Whole white alabastrum(tetraploid) 31.039
CNS0095610Silvery flower (tetraploid) 10.642
CNS0095611Silvery flower (tetraploid) 20.210
CNS0095612Silvery flower (tetraploid) 30.167
CNS0095613Golden flower (tetraploid) 10.177
CNS0095614Golden flower (tetraploid) 20.136
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 12.368
CRR073298Stem 23.673
CRR073299Stem 33.342
CRR073300Leaf 11.273
CRR073301Leaf 21.883
CRR073302Leaf 30.611
CRR073303Juvenile bud 11.290
CRR073304Juvenile bud 21.235
CRR073305Juvenile bud 31.418
CRR073306Third green 10.316
CRR073307Third green 20.389
CRR073308Third green 30.226
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.051
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.099
CRR073316Gold flowering 20.224
CRR073317Gold flowering 30.016
CRR073318Tawny withering 10.600
CRR073319Tawny withering 21.237
CRR073320Tawny withering 30.224