Detail information of GWHGAAZE015323


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006371951.14.1478E-134hypothetical protein POPTR_0018s06630g [Populus trichocarpa]
Swissprottr|Q9C5D7|CAMT3_ARATH7E-119Probable caffeoyl-CoA O-methyltransferase At4g26220
trEMBLtr|B9N5I7|B9N5I7_POPTR2E-134Uncharacterized protein {ECO:0000313|EMBL:ERP49748.1}
TAIR10AT4G26220.11E-94S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene3155938131562345+
GWHAAZE00000004mRNA3155938131562345+
GWHAAZE00000004exon3155938131559449+
GWHAAZE00000004exon3155956231559641+
GWHAAZE00000004exon3156009631560240+
GWHAAZE00000004exon3156082831560959+
GWHAAZE00000004exon3156205531562345+
GWHAAZE00000004CDS3155938131559449+
GWHAAZE00000004CDS3155956231559641+
GWHAAZE00000004CDS3156009631560240+
GWHAAZE00000004CDS3156082831560959+
GWHAAZE00000004CDS3156205531562345+
Transcript Sequence

Network for GWHGAAZE015323

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01596.18Methyltransf_3272372.90E-81
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00588E2.1.1.104 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941

Gene Ontology

GO term OntologyName
GO:0008171molecular_functionO-methyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.797
SRR3591706second leaf6.610
SRR3591707mature leaf10.545
SRR3591708Shoot apex6.731
SRR3591709Stem11.811
SRR3591710White floral bud7.453
SRR3591711White flower6.239
SRR3591712Green floral bud7.408
SRR3591713Yellow flower2.229
SRP173429 SRR8316895Juvenile bud stage 6.782
SRR8316896Juvenile bud stage 12.640
SRR8316897Juvenile bud stage 4.066
SRR8316894Third green stage 4.417
SRR8316900Third green stage 17.507
SRR8316901Third green stage 11.797
SRR8316898Complete white stage 14.197
SRR8316899Complete white stage 42.220
SRR8316903Complete white stage 19.290
SRR8316902Silver flowering stage5.405
SRR8316904Silver flowering stage9.206
SRR8316905Silver flowering stage4.125
SRR8316906Gold flowering stage 6.081
SRR8316907Gold flowering stage 7.368
SRR8316908Gold flowering stage 10.449
SRP132670SRR6706286Control11.931
SRR6706287Light intensity 50%10.744
SRR6706288Light intensity 20%12.282
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.028
CNS0095593Slightly white alabastrum(diploid) 27.376
CNS0095594Slightly white alabastrum(diploid) 35.044
CNS0095595Whole white alabastrum(diploid) 210.764
CNS0095596Whole white alabastrum(diploid) 39.278
CNS0095597Whole white alabastrum(diploid) 412.471
CNS0095598Silvery flower (diploied) 111.572
CNS0095599Silvery flower (diploied) 212.861
CNS0095600Silvery flower (diploied) 317.684
CNS0095601Golden flower (diploid) 18.151
CNS0095602Golden flower (diploid) 211.936
CNS0095603Golden flower (diploid) 310.509
CNS0095604Slightly white alabastrum(tetraploid) 17.557
CNS0095605Slightly white alabastrum(tetraploid) 27.323
CNS0095606Slightly white alabastrum(tetraploid) 36.426
CNS0095607Whole white alabastrum(tetraploid) 15.333
CNS0095608Whole white alabastrum(tetraploid) 210.495
CNS0095609Whole white alabastrum(tetraploid) 39.648
CNS0095610Silvery flower (tetraploid) 131.103
CNS0095611Silvery flower (tetraploid) 237.677
CNS0095612Silvery flower (tetraploid) 336.054
CNS0095613Golden flower (tetraploid) 112.363
CNS0095614Golden flower (tetraploid) 216.490
CNS0095615Golden flower (tetraploid) 34.205
CRA001975CRR073297Stem 110.902
CRR073298Stem 212.611
CRR073299Stem 310.865
CRR073300Leaf 113.079
CRR073301Leaf 212.827
CRR073302Leaf 311.082
CRR073303Juvenile bud 113.121
CRR073304Juvenile bud 212.955
CRR073305Juvenile bud 312.893
CRR073306Third green 12.162
CRR073307Third green 25.177
CRR073308Third green 33.220
CRR073309Second white 11.464
CRR073310Second white 22.548
CRR073311Second white 30.511
CRR073312Silver flowering 10.898
CRR073313Silver flowering 20.204
CRR073314Silver flowering 30.276
CRR073315Gold flowering 112.030
CRR073316Gold flowering 216.869
CRR073317Gold flowering 311.389
CRR073318Tawny withering 19.004
CRR073319Tawny withering 28.070
CRR073320Tawny withering 36.598