Detail information of GWHGAAZE015182


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP01541.10unnamed protein product [Coffea canephora]
Swissprottr|Q8VYN6|PFKA5_ARATH0ATP-dependent 6-phosphofructokinase 5, chloroplastic {ECO:0000255|HAMAP-Rule:MF_03186} (Precursor)
trEMBLtr|A0A068TZ47|A0A068TZ47_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_7 {ECO:0000313|EMBL:CDP01541.1}
TAIR10AT2G22480.10phosphofructokinase 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2716315727173449-
GWHAAZE00000004mRNA2716315727173449-
GWHAAZE00000004exon2717314527173449-
GWHAAZE00000004exon2717191827172008-
GWHAAZE00000004exon2717087527170948-
GWHAAZE00000004exon2717043727170548-
GWHAAZE00000004exon2717016827170260-
GWHAAZE00000004exon2716951927169620-
GWHAAZE00000004exon2716931527169389-
GWHAAZE00000004exon2716871727168881-
GWHAAZE00000004exon2716788227167998-
GWHAAZE00000004exon2716769927167803-
GWHAAZE00000004exon2716687127166951-
GWHAAZE00000004exon2716556827165696-
GWHAAZE00000004exon2716315727163324-
GWHAAZE00000004CDS2717314527173449-
GWHAAZE00000004CDS2717191827172008-
GWHAAZE00000004CDS2717087527170948-
GWHAAZE00000004CDS2717043727170548-
GWHAAZE00000004CDS2717016827170260-
GWHAAZE00000004CDS2716951927169620-
GWHAAZE00000004CDS2716931527169389-
GWHAAZE00000004CDS2716871727168881-
GWHAAZE00000004CDS2716788227167998-
GWHAAZE00000004CDS2716769927167803-
GWHAAZE00000004CDS2716687127166951-
GWHAAZE00000004CDS2716556827165696-
GWHAAZE00000004CDS2716315727163324-
Transcript Sequence

Network for GWHGAAZE015182

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00365.21PFK1764854.80E-60
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00850pfkA, PFK Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Methane metabolismmap00680
RNA degradationmap03018
HIF-1 signaling pathwaymap04066
AMPK signaling pathwaymap04152
Glucagon signaling pathwaymap04922
Thyroid hormone signaling pathwaymap04919

Gene Ontology

GO term OntologyName
GO:0006096biological_processglycolytic process
GO:0006002biological_processfructose 6-phosphate metabolic process
GO:0003872molecular_function6-phosphofructokinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.306
SRR3591706second leaf2.282
SRR3591707mature leaf1.841
SRR3591708Shoot apex7.752
SRR3591709Stem5.812
SRR3591710White floral bud6.306
SRR3591711White flower8.935
SRR3591712Green floral bud4.753
SRR3591713Yellow flower9.314
SRP173429 SRR8316895Juvenile bud stage 6.401
SRR8316896Juvenile bud stage 7.713
SRR8316897Juvenile bud stage 3.334
SRR8316894Third green stage 3.694
SRR8316900Third green stage 8.666
SRR8316901Third green stage 9.595
SRR8316898Complete white stage 8.321
SRR8316899Complete white stage 14.474
SRR8316903Complete white stage 8.742
SRR8316902Silver flowering stage7.750
SRR8316904Silver flowering stage10.026
SRR8316905Silver flowering stage4.831
SRR8316906Gold flowering stage 17.583
SRR8316907Gold flowering stage 16.092
SRR8316908Gold flowering stage 17.726
SRP132670SRR6706286Control9.218
SRR6706287Light intensity 50%8.594
SRR6706288Light intensity 20%10.268
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.788
CNS0095593Slightly white alabastrum(diploid) 25.029
CNS0095594Slightly white alabastrum(diploid) 34.264
CNS0095595Whole white alabastrum(diploid) 24.636
CNS0095596Whole white alabastrum(diploid) 33.941
CNS0095597Whole white alabastrum(diploid) 44.434
CNS0095598Silvery flower (diploied) 14.619
CNS0095599Silvery flower (diploied) 27.397
CNS0095600Silvery flower (diploied) 312.954
CNS0095601Golden flower (diploid) 15.917
CNS0095602Golden flower (diploid) 210.007
CNS0095603Golden flower (diploid) 37.510
CNS0095604Slightly white alabastrum(tetraploid) 14.567
CNS0095605Slightly white alabastrum(tetraploid) 22.601
CNS0095606Slightly white alabastrum(tetraploid) 36.374
CNS0095607Whole white alabastrum(tetraploid) 12.601
CNS0095608Whole white alabastrum(tetraploid) 21.589
CNS0095609Whole white alabastrum(tetraploid) 34.290
CNS0095610Silvery flower (tetraploid) 18.722
CNS0095611Silvery flower (tetraploid) 26.238
CNS0095612Silvery flower (tetraploid) 312.664
CNS0095613Golden flower (tetraploid) 13.849
CNS0095614Golden flower (tetraploid) 24.275
CNS0095615Golden flower (tetraploid) 32.151
CRA001975CRR073297Stem 17.862
CRR073298Stem 26.873
CRR073299Stem 37.081
CRR073300Leaf 19.731
CRR073301Leaf 28.904
CRR073302Leaf 39.519
CRR073303Juvenile bud 111.001
CRR073304Juvenile bud 212.081
CRR073305Juvenile bud 312.931
CRR073306Third green 18.155
CRR073307Third green 210.075
CRR073308Third green 38.239
CRR073309Second white 120.374
CRR073310Second white 214.326
CRR073311Second white 311.592
CRR073312Silver flowering 111.194
CRR073313Silver flowering 212.094
CRR073314Silver flowering 310.801
CRR073315Gold flowering 12.990
CRR073316Gold flowering 23.832
CRR073317Gold flowering 33.408
CRR073318Tawny withering 112.743
CRR073319Tawny withering 214.323
CRR073320Tawny withering 310.400