Detail information of GWHGAAZE014815


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP02802.10unnamed protein product [Coffea canephora]
Swissprottr|Q944K2|OST48_ARATH0Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (Precursor)
trEMBLtr|A0A068U3C7|A0A068U3C7_COFCA0Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit {ECO:0000256|RuleBase:RU361142}
TAIR10AT5G66680.11E-152dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1954059619548073-
GWHAAZE00000004mRNA1954059619548073-
GWHAAZE00000004exon1954059619541045-
GWHAAZE00000004exon1954251319542617-
GWHAAZE00000004exon1954270719542832-
GWHAAZE00000004exon1954294119543012-
GWHAAZE00000004exon1954309619543171-
GWHAAZE00000004exon1954453419544575-
GWHAAZE00000004exon1954465719544712-
GWHAAZE00000004exon1954525719545370-
GWHAAZE00000004exon1954551419545567-
GWHAAZE00000004exon1954622719546352-
GWHAAZE00000004exon1954756019547696-
GWHAAZE00000004exon1954780019548073-
GWHAAZE00000004CDS1954780019548073-
GWHAAZE00000004CDS1954756019547696-
GWHAAZE00000004CDS1954622719546352-
GWHAAZE00000004CDS1954551419545567-
GWHAAZE00000004CDS1954525719545370-
GWHAAZE00000004CDS1954465719544712-
GWHAAZE00000004CDS1954453419544575-
GWHAAZE00000004CDS1954309619543171-
GWHAAZE00000004CDS1954294119543012-
GWHAAZE00000004CDS1954270719542832-
GWHAAZE00000004CDS1954251319542617-
GWHAAZE00000004CDS1954099819541045-
GWHAAZE00000004three_prime_UTR1954059619540997-
Transcript Sequence

Network for GWHGAAZE014815

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03345.15DDOST_48kD333951.50E-105
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12670WBP1 Metabolic pathways map01100
N-Glycan biosynthesismap00510
Various types of N-glycan biosynthesismap00513
Protein processing in endoplasmic reticulummap04141

Gene Ontology

GO term OntologyName
GO:0018279biological_processprotein N-linked glycosylation via asparagine
GO:0005789cellular_componentendoplasmic reticulum membrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf156.971
SRR3591706second leaf88.735
SRR3591707mature leaf67.530
SRR3591708Shoot apex140.873
SRR3591709Stem92.391
SRR3591710White floral bud101.811
SRR3591711White flower123.224
SRR3591712Green floral bud114.913
SRR3591713Yellow flower85.742
SRP173429 SRR8316895Juvenile bud stage 73.349
SRR8316896Juvenile bud stage 96.860
SRR8316897Juvenile bud stage 51.541
SRR8316894Third green stage 38.450
SRR8316900Third green stage 107.286
SRR8316901Third green stage 102.297
SRR8316898Complete white stage 32.224
SRR8316899Complete white stage 111.585
SRR8316903Complete white stage 55.463
SRR8316902Silver flowering stage41.487
SRR8316904Silver flowering stage50.341
SRR8316905Silver flowering stage21.239
SRR8316906Gold flowering stage 76.902
SRR8316907Gold flowering stage 74.998
SRR8316908Gold flowering stage 92.059
SRP132670SRR6706286Control80.625
SRR6706287Light intensity 50%84.891
SRR6706288Light intensity 20%93.404
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1102.628
CNS0095593Slightly white alabastrum(diploid) 290.654
CNS0095594Slightly white alabastrum(diploid) 385.170
CNS0095595Whole white alabastrum(diploid) 277.555
CNS0095596Whole white alabastrum(diploid) 378.372
CNS0095597Whole white alabastrum(diploid) 471.217
CNS0095598Silvery flower (diploied) 181.425
CNS0095599Silvery flower (diploied) 280.045
CNS0095600Silvery flower (diploied) 393.250
CNS0095601Golden flower (diploid) 167.691
CNS0095602Golden flower (diploid) 2101.189
CNS0095603Golden flower (diploid) 398.633
CNS0095604Slightly white alabastrum(tetraploid) 175.704
CNS0095605Slightly white alabastrum(tetraploid) 270.910
CNS0095606Slightly white alabastrum(tetraploid) 3116.705
CNS0095607Whole white alabastrum(tetraploid) 147.617
CNS0095608Whole white alabastrum(tetraploid) 241.063
CNS0095609Whole white alabastrum(tetraploid) 381.346
CNS0095610Silvery flower (tetraploid) 186.964
CNS0095611Silvery flower (tetraploid) 282.065
CNS0095612Silvery flower (tetraploid) 354.960
CNS0095613Golden flower (tetraploid) 145.128
CNS0095614Golden flower (tetraploid) 280.567
CNS0095615Golden flower (tetraploid) 343.803
CRA001975CRR073297Stem 1107.282
CRR073298Stem 293.551
CRR073299Stem 3110.907
CRR073300Leaf 193.511
CRR073301Leaf 285.700
CRR073302Leaf 3102.440
CRR073303Juvenile bud 1110.404
CRR073304Juvenile bud 295.135
CRR073305Juvenile bud 3108.644
CRR073306Third green 118.503
CRR073307Third green 221.263
CRR073308Third green 325.681
CRR073309Second white 133.375
CRR073310Second white 221.499
CRR073311Second white 314.844
CRR073312Silver flowering 112.832
CRR073313Silver flowering 219.419
CRR073314Silver flowering 314.109
CRR073315Gold flowering 149.144
CRR073316Gold flowering 270.489
CRR073317Gold flowering 362.378
CRR073318Tawny withering 188.948
CRR073319Tawny withering 280.363
CRR073320Tawny withering 382.551