Detail information of GWHGAAZE014712


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008342598.10PREDICTED: probable hexokinase-like 2 protein [Malus domestica]
Swissprottr|Q9T071|HXKL2_ARATH8E-165Probable hexokinase-like 2 protein
trEMBLtr|M5W8C4|M5W8C4_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ09959.1}
TAIR10AT4G37840.14E-125hexokinase-like 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1712360817128112-
GWHAAZE00000004mRNA1712360817128112-
GWHAAZE00000004exon1712360817123931-
GWHAAZE00000004exon1712407217124153-
GWHAAZE00000004exon1712436117124491-
GWHAAZE00000004exon1712457917124677-
GWHAAZE00000004exon1712479117124946-
GWHAAZE00000004exon1712520017125274-
GWHAAZE00000004exon1712539817125580-
GWHAAZE00000004exon1712577517125925-
GWHAAZE00000004exon1712641417126527-
GWHAAZE00000004exon1712782917128112-
GWHAAZE00000004CDS1712782917128112-
GWHAAZE00000004CDS1712641417126527-
GWHAAZE00000004CDS1712577517125925-
GWHAAZE00000004CDS1712539817125580-
GWHAAZE00000004CDS1712520017125274-
GWHAAZE00000004CDS1712479117124946-
GWHAAZE00000004CDS1712457917124677-
GWHAAZE00000004CDS1712436117124491-
GWHAAZE00000004CDS1712407217124153-
GWHAAZE00000004CDS1712360817123931-
Transcript Sequence

Network for GWHGAAZE014712

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00349.22Hexokinase_11342822.70E-25
PF03727.17Hexokinase_22895248.60E-65
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00844HK Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520
Streptomycin biosynthesismap00521
Neomycin, kanamycin and gentamicin biosynthesismap00524
HIF-1 signaling pathwaymap04066
Insulin signaling pathwaymap04910
Carbohydrate digestion and absorptionmap04973

Gene Ontology

GO term OntologyName
GO:0001678biological_processcellular glucose homeostasis
GO:0005975biological_processcarbohydrate metabolic process
GO:0004396molecular_functionhexokinase activity
GO:0005524molecular_functionATP binding
GO:0005536molecular_functionglucose binding
GO:0016773molecular_functionphosphotransferase activity, alcohol group as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.081
SRR3591708Shoot apex0.693
SRR3591709Stem0.119
SRR3591710White floral bud4.008
SRR3591711White flower0.284
SRR3591712Green floral bud27.947
SRR3591713Yellow flower0.100
SRP173429 SRR8316895Juvenile bud stage 12.636
SRR8316896Juvenile bud stage 36.800
SRR8316897Juvenile bud stage 16.729
SRR8316894Third green stage 13.037
SRR8316900Third green stage 39.076
SRR8316901Third green stage 46.368
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.308
SRR8316903Complete white stage 0.063
SRR8316902Silver flowering stage0.040
SRR8316904Silver flowering stage0.128
SRR8316905Silver flowering stage0.030
SRR8316906Gold flowering stage 0.025
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control18.769
SRR6706287Light intensity 50%15.909
SRR6706288Light intensity 20%12.804
CNP0000432CNS0095592Slightly white alabastrum(diploid) 134.093
CNS0095593Slightly white alabastrum(diploid) 221.155
CNS0095594Slightly white alabastrum(diploid) 340.008
CNS0095595Whole white alabastrum(diploid) 243.087
CNS0095596Whole white alabastrum(diploid) 357.140
CNS0095597Whole white alabastrum(diploid) 447.530
CNS0095598Silvery flower (diploied) 10.238
CNS0095599Silvery flower (diploied) 21.138
CNS0095600Silvery flower (diploied) 30.098
CNS0095601Golden flower (diploid) 10.364
CNS0095602Golden flower (diploid) 20.222
CNS0095603Golden flower (diploid) 30.112
CNS0095604Slightly white alabastrum(tetraploid) 152.270
CNS0095605Slightly white alabastrum(tetraploid) 251.843
CNS0095606Slightly white alabastrum(tetraploid) 30.032
CNS0095607Whole white alabastrum(tetraploid) 169.465
CNS0095608Whole white alabastrum(tetraploid) 258.099
CNS0095609Whole white alabastrum(tetraploid) 344.682
CNS0095610Silvery flower (tetraploid) 10.084
CNS0095611Silvery flower (tetraploid) 20.394
CNS0095612Silvery flower (tetraploid) 30.715
CNS0095613Golden flower (tetraploid) 10.146
CNS0095614Golden flower (tetraploid) 20.053
CNS0095615Golden flower (tetraploid) 30.526
CRA001975CRR073297Stem 18.093
CRR073298Stem 28.377
CRR073299Stem 35.424
CRR073300Leaf 117.755
CRR073301Leaf 214.874
CRR073302Leaf 39.402
CRR073303Juvenile bud 17.738
CRR073304Juvenile bud 23.555
CRR073305Juvenile bud 30.264
CRR073306Third green 10.802
CRR073307Third green 20.406
CRR073308Third green 30.948
CRR073309Second white 10.000
CRR073310Second white 20.219
CRR073311Second white 30.257
CRR073312Silver flowering 10.394
CRR073313Silver flowering 20.371
CRR073314Silver flowering 31.136
CRR073315Gold flowering 11.099
CRR073316Gold flowering 20.103
CRR073317Gold flowering 30.185
CRR073318Tawny withering 10.669
CRR073319Tawny withering 20.391
CRR073320Tawny withering 30.813