Gene detail

Detail information of GWHGAAZE014653

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010652717.1	0	PREDICTED: probable N-acetyltransferase HLS1 [Vitis vinifera]
Swissprot	tr\|O64815\|HLS1L_ARATH	0	Probable N-acetyltransferase HLS1-like
trEMBL	tr\|D7TT81\|D7TT81_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI33703.3}
TAIR10	AT2G23060.1	5E-175	Acyl-CoA N-acyltransferases (NAT) superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	16121521	16123113	+
GWHAAZE00000004	mRNA	16121521	16123113	+
GWHAAZE00000004	exon	16121521	16121685	+
GWHAAZE00000004	exon	16121834	16122051	+
GWHAAZE00000004	exon	16122246	16123113	+
GWHAAZE00000004	CDS	16121521	16121685	+
GWHAAZE00000004	CDS	16121834	16122051	+
GWHAAZE00000004	CDS	16122246	16123113	+

Transcript Sequence
>GWHTAAZE014667 ATGGTAATAGAGGTAAGAGAGTTTGATCCAAGAAGAGATATTAGTGGAGTAGAAGAGGTAGAGACAAGGTGCGAGGTTGGTCCCAGTGGTAAACTCTCCCTCTTCACTGACCTTTTAGGTGACCCTATTTGCAGAGTCCGCCACTCTCCCGCCTTTCTCATGCTGGTAGCTGAAATTGTGGTCAGTAAGAGAGATAAACAAGTTGGAGAAGAAGTGGAAGAGAGACAAATAGTTGGGATGATAAGAGGTTGCATAAAAACCGTTACTTGCGGCAAAAAACTCTCTAGAAACGCCGTCAAAAATACTAATGATTCTACCAAAACACTCCCAATCTACACTAGACTCGCCTACATCTTAGGCCTTCGCGTTTCTCCTTCTCACCGGCGAATGAAAATAGGACTGAAGCTAGTGCAGAAAATGGAGGAGTGGTTCCGGGAAAACGGAGCCGAATATTCTTATATAGCAACGGATAACGACAACCAAGCCTCCGTTAACCTCTTTACCCACAAATGCGGTTACTCCAAGTTCCGTACCCCCTCCATTCTCGTCCAACCCGTTTACGCCCACCGGGTCAAACTCCCAACGAGACAAATCACCATCCTCAAACTATCCCCTTCCGACGCCGAGTCCCTCTACCGACGCCGCTTCTCCACAACCGAGTTCTTTCCCCGGGATATCGACTCCGTCCTCACCAATAAGCTCAACCTCGGCACCTTCCTCGCGGTCCCCCGAGACCCGTGCGACCCACTAGCCTTCCGCGGGTCGGACAAGTTCCTTTCCAACCCGCCAGAGTCGTGGGCAGTCCTCAGCGTGTGGAACTGTAAGGACGTTTTCAAACTCGAGGTGCGAGGCGCGTCGCGCGTGAAGAAGGGGCTGGCAAAAACGACCCGTTTGTTGGACCGGGCCCTCCCGTTTTTGCAATTGCCGTCGGTGCCGGAAGTATTTAGGCCATTTGGGCTTCACTTTATGTATGGGCTTGGGGGTGAAGGCCCATTAGCGGTGAAGTACATAAAGGCACTGTGTGGCTATGCGCATAATTTGGCAAAGGAGTGTGGGTGTGGGGTGGTGGCAACGGAGGTTTCGTGTATGGAGCCGCTCAGGAATGGGATACCGCACTGGAAGAAACTATCGTGCGCCGAGGATTTGTGGTGCATCAAGCGGCTAGGGGAAGACTACAGTGACGGCTCTGTTGGTGACTGGACTAAATCACCACCTGGTGTGTCCGTTTTTGTTGATCCTAGAGAGGTTTAG

Network for GWHGAAZE014653

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00583.26	Acetyltransf_1	73	173	1.80E-16

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008080	molecular_function	N-acetyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.487
	SRR3591706	second leaf	0.279
	SRR3591707	mature leaf	0.579
	SRR3591708	Shoot apex	1.167
	SRR3591709	Stem	0.561
	SRR3591710	White floral bud	7.320
	SRR3591711	White flower	4.807
	SRR3591712	Green floral bud	0.606
	SRR3591713	Yellow flower	3.177
SRP173429	SRR8316895	Juvenile bud stage	0.709
	SRR8316896	Juvenile bud stage	0.949
	SRR8316897	Juvenile bud stage	0.757
	SRR8316894	Third green stage	0.364
	SRR8316900	Third green stage	0.285
	SRR8316901	Third green stage	0.244
	SRR8316898	Complete white stage	1.330
	SRR8316899	Complete white stage	0.331
	SRR8316903	Complete white stage	2.150
	SRR8316902	Silver flowering stage	2.109
	SRR8316904	Silver flowering stage	3.108
	SRR8316905	Silver flowering stage	1.864
	SRR8316906	Gold flowering stage	4.235
	SRR8316907	Gold flowering stage	4.763
	SRR8316908	Gold flowering stage	8.543
SRP132670	SRR6706286	Control	0.995
	SRR6706287	Light intensity 50%	0.931
	SRR6706288	Light intensity 20%	0.373
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.265
	CNS0095593	Slightly white alabastrum(diploid) 2	0.690
	CNS0095594	Slightly white alabastrum(diploid) 3	0.656
	CNS0095595	Whole white alabastrum(diploid) 2	0.149
	CNS0095596	Whole white alabastrum(diploid) 3	0.501
	CNS0095597	Whole white alabastrum(diploid) 4	0.360
	CNS0095598	Silvery flower (diploied) 1	1.887
	CNS0095599	Silvery flower (diploied) 2	0.647
	CNS0095600	Silvery flower (diploied) 3	3.871
	CNS0095601	Golden flower (diploid) 1	0.944
	CNS0095602	Golden flower (diploid) 2	3.150
	CNS0095603	Golden flower (diploid) 3	2.014
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.410
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.803
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.211
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.514
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.088
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.324
	CNS0095610	Silvery flower (tetraploid) 1	5.086
	CNS0095611	Silvery flower (tetraploid) 2	2.869
	CNS0095612	Silvery flower (tetraploid) 3	35.353
	CNS0095613	Golden flower (tetraploid) 1	12.099
	CNS0095614	Golden flower (tetraploid) 2	5.836
	CNS0095615	Golden flower (tetraploid) 3	15.565
CRA001975	CRR073297	Stem 1	3.235
	CRR073298	Stem 2	2.529
	CRR073299	Stem 3	4.871
	CRR073300	Leaf 1	1.282
	CRR073301	Leaf 2	1.867
	CRR073302	Leaf 3	1.979
	CRR073303	Juvenile bud 1	1.561
	CRR073304	Juvenile bud 2	3.128
	CRR073305	Juvenile bud 3	2.898
	CRR073306	Third green 1	135.976
	CRR073307	Third green 2	80.274
	CRR073308	Third green 3	100.400
	CRR073309	Second white 1	68.022
	CRR073310	Second white 2	58.690
	CRR073311	Second white 3	49.559
	CRR073312	Silver flowering 1	43.115
	CRR073313	Silver flowering 2	49.418
	CRR073314	Silver flowering 3	37.502
	CRR073315	Gold flowering 1	0.453
	CRR073316	Gold flowering 2	0.842
	CRR073317	Gold flowering 3	0.402
	CRR073318	Tawny withering 1	1.008
	CRR073319	Tawny withering 2	1.314
	CRR073320	Tawny withering 3	0.137