Detail information of GWHGAAZE014650


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN78133.10hypothetical protein VITISV_034052 [Vitis vinifera]
trEMBLtr|A5APC8|A5APC8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN78133.1}
TAIR10AT4G37560.10Acetamidase/Formamidase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1605915116062380+
GWHAAZE00000004mRNA1605915116062380+
GWHAAZE00000004exon1605915116059369+
GWHAAZE00000004exon1605969216059929+
GWHAAZE00000004exon1606001316060203+
GWHAAZE00000004exon1606032516060560+
GWHAAZE00000004exon1606134316061586+
GWHAAZE00000004exon1606169816061805+
GWHAAZE00000004exon1606225816062380+
GWHAAZE00000004CDS1605915116059369+
GWHAAZE00000004CDS1605969216059929+
GWHAAZE00000004CDS1606001316060203+
GWHAAZE00000004CDS1606032516060560+
GWHAAZE00000004CDS1606134316061586+
GWHAAZE00000004CDS1606169816061805+
GWHAAZE00000004CDS1606225816062380+
Transcript Sequence

Network for GWHGAAZE014650

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03069.16FmdA_AmdA124126.90E-167
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01455E3.5.1.49 Metabolic pathways map01100
Carbon metabolismmap01200
Glyoxylate and dicarboxylate metabolismmap00630
Nitrogen metabolismmap00910
Cyanoamino acid metabolismmap00460

Gene Ontology

GO term OntologyName
GO:0016811molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.449
SRR3591706second leaf27.588
SRR3591707mature leaf116.765
SRR3591708Shoot apex14.368
SRR3591709Stem176.274
SRR3591710White floral bud162.653
SRR3591711White flower174.402
SRR3591712Green floral bud60.371
SRR3591713Yellow flower218.010
SRP173429 SRR8316895Juvenile bud stage 31.216
SRR8316896Juvenile bud stage 46.426
SRR8316897Juvenile bud stage 14.264
SRR8316894Third green stage 17.672
SRR8316900Third green stage 74.212
SRR8316901Third green stage 69.436
SRR8316898Complete white stage 121.173
SRR8316899Complete white stage 178.801
SRR8316903Complete white stage 126.576
SRR8316902Silver flowering stage73.605
SRR8316904Silver flowering stage94.226
SRR8316905Silver flowering stage51.583
SRR8316906Gold flowering stage 150.120
SRR8316907Gold flowering stage 203.070
SRR8316908Gold flowering stage 239.132
SRP132670SRR6706286Control102.886
SRR6706287Light intensity 50%100.068
SRR6706288Light intensity 20%112.112
CNP0000432CNS0095592Slightly white alabastrum(diploid) 137.694
CNS0095593Slightly white alabastrum(diploid) 238.477
CNS0095594Slightly white alabastrum(diploid) 348.382
CNS0095595Whole white alabastrum(diploid) 244.789
CNS0095596Whole white alabastrum(diploid) 360.738
CNS0095597Whole white alabastrum(diploid) 466.186
CNS0095598Silvery flower (diploied) 1112.579
CNS0095599Silvery flower (diploied) 293.344
CNS0095600Silvery flower (diploied) 3239.977
CNS0095601Golden flower (diploid) 196.365
CNS0095602Golden flower (diploid) 2196.311
CNS0095603Golden flower (diploid) 3196.442
CNS0095604Slightly white alabastrum(tetraploid) 144.270
CNS0095605Slightly white alabastrum(tetraploid) 248.188
CNS0095606Slightly white alabastrum(tetraploid) 354.112
CNS0095607Whole white alabastrum(tetraploid) 148.079
CNS0095608Whole white alabastrum(tetraploid) 260.357
CNS0095609Whole white alabastrum(tetraploid) 381.384
CNS0095610Silvery flower (tetraploid) 1318.274
CNS0095611Silvery flower (tetraploid) 2312.190
CNS0095612Silvery flower (tetraploid) 3149.259
CNS0095613Golden flower (tetraploid) 1255.715
CNS0095614Golden flower (tetraploid) 2277.390
CNS0095615Golden flower (tetraploid) 3169.644
CRA001975CRR073297Stem 135.970
CRR073298Stem 235.131
CRR073299Stem 345.128
CRR073300Leaf 142.711
CRR073301Leaf 245.935
CRR073302Leaf 353.787
CRR073303Juvenile bud 159.914
CRR073304Juvenile bud 296.971
CRR073305Juvenile bud 380.433
CRR073306Third green 146.939
CRR073307Third green 244.654
CRR073308Third green 345.519
CRR073309Second white 173.123
CRR073310Second white 240.759
CRR073311Second white 345.412
CRR073312Silver flowering 134.993
CRR073313Silver flowering 247.451
CRR073314Silver flowering 328.310
CRR073315Gold flowering 1110.957
CRR073316Gold flowering 2125.105
CRR073317Gold flowering 3113.392
CRR073318Tawny withering 182.298
CRR073319Tawny withering 265.549
CRR073320Tawny withering 355.939