Detail information of GWHGAAZE014617


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009367435.17.89996E-73PREDICTED: SUMO-conjugating enzyme SCE1 [Pyrus x bretschneideri]
Swissprottr|Q42551|SCE1_ARATH6E-67SUMO-conjugating enzyme SCE1
trEMBLtr|M5W0I7|M5W0I7_PRUPE9E-73Uncharacterized protein {ECO:0000313|EMBL:EMJ07252.1}
TAIR10AT3G57870.18E-42sumo conjugation enzyme 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1545346915458421-
GWHAAZE00000004mRNA1545346915458421-
GWHAAZE00000004exon1545835315458421-
GWHAAZE00000004exon1545816915458252-
GWHAAZE00000004exon1545498615455138-
GWHAAZE00000004exon1545346915453531-
GWHAAZE00000004CDS1545835315458421-
GWHAAZE00000004CDS1545816915458252-
GWHAAZE00000004CDS1545498615455138-
GWHAAZE00000004CDS1545346915453531-
Transcript Sequence

Network for GWHGAAZE014617

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0223GO:0019773 proteasome core complex, alpha-subunit complex GOslim:cellular_component
GO:0005839 proteasome core complex GOslim:cellular_component
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives GOslim:molecular_function
Ubiquitin_UBC family Ubiquitin_UBC family
GO:0004175 endopeptidase activity GOslim:molecular_function
GO:0004298 threonine-type endopeptidase activity GOslim:molecular_function
GO:0051603 proteolysis involved in cellular protein catabolic process GOslim:biological_process
GO:0015031 protein transport GOslim:biological_process
GO:0006511 ubiquitin-dependent protein catabolic process GOslim:biological_process


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.27UQ_con91012.20E-27
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10577UBE2I, UBC9 RNA transport map03013
Ubiquitin mediated proteolysismap04120
NF-kappa B signaling pathwaymap04064

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf209.417
SRR3591706second leaf119.484
SRR3591707mature leaf114.492
SRR3591708Shoot apex197.588
SRR3591709Stem211.606
SRR3591710White floral bud231.384
SRR3591711White flower328.779
SRR3591712Green floral bud181.286
SRR3591713Yellow flower349.610
SRP173429 SRR8316895Juvenile bud stage 137.861
SRR8316896Juvenile bud stage 173.721
SRR8316897Juvenile bud stage 71.412
SRR8316894Third green stage 59.547
SRR8316900Third green stage 228.117
SRR8316901Third green stage 243.288
SRR8316898Complete white stage 146.724
SRR8316899Complete white stage 398.337
SRR8316903Complete white stage 179.423
SRR8316902Silver flowering stage200.958
SRR8316904Silver flowering stage137.416
SRR8316905Silver flowering stage98.651
SRR8316906Gold flowering stage 445.538
SRR8316907Gold flowering stage 446.001
SRR8316908Gold flowering stage 422.789
SRP132670SRR6706286Control429.510
SRR6706287Light intensity 50%369.890
SRR6706288Light intensity 20%383.647
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1178.706
CNS0095593Slightly white alabastrum(diploid) 2228.534
CNS0095594Slightly white alabastrum(diploid) 3159.992
CNS0095595Whole white alabastrum(diploid) 2151.246
CNS0095596Whole white alabastrum(diploid) 3151.834
CNS0095597Whole white alabastrum(diploid) 4134.617
CNS0095598Silvery flower (diploied) 1180.858
CNS0095599Silvery flower (diploied) 2210.723
CNS0095600Silvery flower (diploied) 3247.813
CNS0095601Golden flower (diploid) 1199.382
CNS0095602Golden flower (diploid) 2266.177
CNS0095603Golden flower (diploid) 3260.161
CNS0095604Slightly white alabastrum(tetraploid) 1153.367
CNS0095605Slightly white alabastrum(tetraploid) 2147.856
CNS0095606Slightly white alabastrum(tetraploid) 3254.801
CNS0095607Whole white alabastrum(tetraploid) 1141.745
CNS0095608Whole white alabastrum(tetraploid) 2109.808
CNS0095609Whole white alabastrum(tetraploid) 3176.549
CNS0095610Silvery flower (tetraploid) 1276.121
CNS0095611Silvery flower (tetraploid) 2235.516
CNS0095612Silvery flower (tetraploid) 3299.552
CNS0095613Golden flower (tetraploid) 1249.889
CNS0095614Golden flower (tetraploid) 2285.142
CNS0095615Golden flower (tetraploid) 3392.359
CRA001975CRR073297Stem 1142.143
CRR073298Stem 2136.023
CRR073299Stem 3179.250
CRR073300Leaf 1163.148
CRR073301Leaf 2190.120
CRR073302Leaf 3194.326
CRR073303Juvenile bud 1181.123
CRR073304Juvenile bud 2197.814
CRR073305Juvenile bud 3194.387
CRR073306Third green 1202.231
CRR073307Third green 2201.623
CRR073308Third green 3180.110
CRR073309Second white 1271.645
CRR073310Second white 2212.253
CRR073311Second white 3139.649
CRR073312Silver flowering 1174.972
CRR073313Silver flowering 2208.811
CRR073314Silver flowering 3172.311
CRR073315Gold flowering 1116.330
CRR073316Gold flowering 2133.534
CRR073317Gold flowering 3122.084
CRR073318Tawny withering 1195.740
CRR073319Tawny withering 2211.796
CRR073320Tawny withering 3179.916