Gene detail

Detail information of GWHGAAZE014593

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CBI32407.3	0	unnamed protein product [Vitis vinifera]
Swissprot	tr\|Q9LJK2\|ABAH4_ARATH	0	Abscisic acid 8'-hydroxylase 4
trEMBL	tr\|A0A061E7N9\|A0A061E7N9_THECC	0	Abscisic acid 8'-hydroxylase 4 isoform 1 {ECO:0000313\|EMBL:EOX98258.1}
TAIR10	AT3G19270.1	2E-147	cytochrome P450, family 707, subfamily A, polypeptide 4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	14860470	14866437	+
GWHAAZE00000004	mRNA	14860470	14866437	+
GWHAAZE00000004	exon	14860470	14860591	+
GWHAAZE00000004	exon	14860920	14861241	+
GWHAAZE00000004	exon	14862847	14862996	+
GWHAAZE00000004	exon	14863112	14863267	+
GWHAAZE00000004	exon	14863491	14863580	+
GWHAAZE00000004	exon	14863979	14864057	+
GWHAAZE00000004	exon	14865466	14865572	+
GWHAAZE00000004	exon	14865699	14865817	+
GWHAAZE00000004	exon	14866159	14866437	+
GWHAAZE00000004	CDS	14860470	14860591	+
GWHAAZE00000004	CDS	14860920	14861241	+
GWHAAZE00000004	CDS	14862847	14862996	+
GWHAAZE00000004	CDS	14863112	14863267	+
GWHAAZE00000004	CDS	14863491	14863580	+
GWHAAZE00000004	CDS	14863979	14864057	+
GWHAAZE00000004	CDS	14865466	14865572	+
GWHAAZE00000004	CDS	14865699	14865817	+
GWHAAZE00000004	CDS	14866159	14866258	+
GWHAAZE00000004	three_prime_UTR	14866259	14866437	+

Transcript Sequence
>GWHTAAZE014607 ATGAGAGAGCTTCAAGTTGGACCAAAACTCCCACCAGGTTCAATGGGATGGCCTTACGTAGGAGAGACTCTCAAACTATTTTCACAAAATCCCTCTGTATTCTTTGACACTAGATACAGAAGGCATGGAAAGATATTTAAGACACACATACTAGGCTGTCCGAGTGTGATGTTGGCGTGCCCGGAGGCTGCCCGGTTTGTGCTGGTCACACACGCACACTTGTTCAGGCCGAGCTATCCTCGTACAAAGGAACTATTGATTGGTCCAGCGGCGCTTTTTTTCCACCAAGGACCTTACCATCTTCAAGTTAGAAAATTAGTACAATCCTCTCTTTCATTGGATGCCATCAGAAGATTAGTCCCTGCCATTGAGGCCATGGCTGTATCGGCCTTGGAGTCGTGGTGCAATGGTGAAGCTATCAACACCTTCCTTGAGATGAAGAAGTTCACTTTTGAAGTAGCTGTCTTATCCATATTGGGTGAGTTGGACCCGGAACAAAGAAAAAACTTGAAAAAGAACTACTACTCCCTTGACAAAGGTTACAACTGTTTTCCCGTAAACCTTCCAGGCTCTCTCTTTCGTAAAGCCCTACAGGCTAGAAAGCGTCTGGGTGAGATGATCCGCGAGATTATTATGGAGGGAAGAGAGAAGAAAATTGTACAGAAGAATCTATTGAGTTATTTGTTGAACTTCACGGATGAAAATGGACAGTTTTTATCGGAGGATCAAATCGCGGATAACATTATTGGGAGAGAACAGAAGGCGGTGTTTGAGTCAAATAATGGAGGAAAGCAACCACTAACATGGGCTCAGACTAGGAATATGCCATTTACTCATAGGGTTCTAATGGAGAGCTTAAGGATGGCTAGCATAGTTTCCTTCGCCTATAGGGAAGCTGTCGTAGATGTCGACTACAATGGGTTCCTTATTCCAAAAGGGTGGAAAGTTTTGCCTTTGTTTCGAATCATCCATCACAATCCAGAATTCTTTCGCCAACCTGAGAACTTCGATCCTTCAAGATTTAAGGTTAGACAAAAGCCCCATACATATTTGCCCTTTGGAAATGGAGCCCATACCTGTCCCGGAAATGAACTTGCCAAGCTCGAGATGCTTGTCATGATCCATCACCTCGTCACAAAATTCAGGTGGGAAGTAGTTGGGCCGAAGAGTGAGGTACAATATGCCCCATTTCCAATACCAAAAGGAGGACTCAAGGCCAAGTTTTGGAAGAAGGAATCCAATTAATTAATGTCCAACTTAACCCATCCATTGCTTTTGACAGCAAATCGAGTGGCATGAACAACCACCGTTTCTAGACGGATACTGCGTAGTAGTAATAGCTAGCGCTTAGCTATCTACCTATAATTAATTAAGCACATGCATACCTAGCTAGATTTCTAACTATGACACTGTATTCCTTCGAG

Network for GWHGAAZE014593

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	11	248	1.90E-15
PF00067.23	p450	262	387	3.30E-37

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09843	CYP707A	Carotenoid biosynthesis	map00906

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	molecular_function	iron ion binding
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.067
	SRR3591706	second leaf	1.426
	SRR3591707	mature leaf	5.237
	SRR3591708	Shoot apex	0.306
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	10.370
	SRR3591711	White flower	4.008
	SRR3591712	Green floral bud	0.276
	SRR3591713	Yellow flower	3.834
SRP173429	SRR8316895	Juvenile bud stage	1.781
	SRR8316896	Juvenile bud stage	1.332
	SRR8316897	Juvenile bud stage	0.945
	SRR8316894	Third green stage	0.536
	SRR8316900	Third green stage	1.858
	SRR8316901	Third green stage	1.718
	SRR8316898	Complete white stage	4.630
	SRR8316899	Complete white stage	0.831
	SRR8316903	Complete white stage	5.509
	SRR8316902	Silver flowering stage	6.409
	SRR8316904	Silver flowering stage	5.072
	SRR8316905	Silver flowering stage	3.398
	SRR8316906	Gold flowering stage	13.045
	SRR8316907	Gold flowering stage	5.309
	SRR8316908	Gold flowering stage	6.765
SRP132670	SRR6706286	Control	0.781
	SRR6706287	Light intensity 50%	0.712
	SRR6706288	Light intensity 20%	0.712
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.529
	CNS0095593	Slightly white alabastrum(diploid) 2	0.923
	CNS0095594	Slightly white alabastrum(diploid) 3	1.101
	CNS0095595	Whole white alabastrum(diploid) 2	0.899
	CNS0095596	Whole white alabastrum(diploid) 3	0.425
	CNS0095597	Whole white alabastrum(diploid) 4	0.848
	CNS0095598	Silvery flower (diploied) 1	0.342
	CNS0095599	Silvery flower (diploied) 2	1.008
	CNS0095600	Silvery flower (diploied) 3	1.810
	CNS0095601	Golden flower (diploid) 1	0.708
	CNS0095602	Golden flower (diploid) 2	1.821
	CNS0095603	Golden flower (diploid) 3	1.409
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.815
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.714
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.800
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.999
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.103
	CNS0095609	Whole white alabastrum(tetraploid) 3	3.523
	CNS0095610	Silvery flower (tetraploid) 1	1.857
	CNS0095611	Silvery flower (tetraploid) 2	1.864
	CNS0095612	Silvery flower (tetraploid) 3	12.512
	CNS0095613	Golden flower (tetraploid) 1	1.981
	CNS0095614	Golden flower (tetraploid) 2	2.429
	CNS0095615	Golden flower (tetraploid) 3	1.128
CRA001975	CRR073297	Stem 1	0.689
	CRR073298	Stem 2	0.462
	CRR073299	Stem 3	0.246
	CRR073300	Leaf 1	0.430
	CRR073301	Leaf 2	0.462
	CRR073302	Leaf 3	0.381
	CRR073303	Juvenile bud 1	0.173
	CRR073304	Juvenile bud 2	0.440
	CRR073305	Juvenile bud 3	0.158
	CRR073306	Third green 1	12.491
	CRR073307	Third green 2	6.624
	CRR073308	Third green 3	8.587
	CRR073309	Second white 1	9.233
	CRR073310	Second white 2	16.453
	CRR073311	Second white 3	15.112
	CRR073312	Silver flowering 1	8.057
	CRR073313	Silver flowering 2	7.730
	CRR073314	Silver flowering 3	3.831
	CRR073315	Gold flowering 1	0.940
	CRR073316	Gold flowering 2	0.108
	CRR073317	Gold flowering 3	0.094
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.008
	CRR073320	Tawny withering 3	0.000