Detail information of GWHGAAZE014485


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAGT80621.10S-adenosylmethionine decarboxylase [Camellia sinensis]
Swissprottr|Q96471|DCAM_IPONI0S-adenosylmethionine decarboxylase beta chain (Precursor)
trEMBLtr|T1UPE7|T1UPE7_CAMSI0S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|PIRNR:PIRNR001355}
TAIR10AT5G15950.29E-126Adenosylmethionine decarboxylase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1282284912823937-
GWHAAZE00000004mRNA1282284912823937-
GWHAAZE00000004exon1282284912823937-
GWHAAZE00000004CDS1282284912823937-
Transcript Sequence

Network for GWHGAAZE014485

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01536.17SAM_decarbox93321.10E-108
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01611speD, AMD1 Metabolic pathways map01100
Cysteine and methionine metabolismmap00270
Arginine and proline metabolismmap00330

Gene Ontology

GO term OntologyName
GO:0008295biological_processspermidine biosynthetic process
GO:0006597biological_processspermine biosynthetic process
GO:0004014molecular_functionadenosylmethionine decarboxylase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf72.502
SRR3591706second leaf57.614
SRR3591707mature leaf186.807
SRR3591708Shoot apex43.706
SRR3591709Stem140.672
SRR3591710White floral bud118.760
SRR3591711White flower94.065
SRR3591712Green floral bud81.526
SRR3591713Yellow flower43.245
SRP173429 SRR8316895Juvenile bud stage 40.465
SRR8316896Juvenile bud stage 59.284
SRR8316897Juvenile bud stage 21.365
SRR8316894Third green stage 30.534
SRR8316900Third green stage 111.380
SRR8316901Third green stage 102.925
SRR8316898Complete white stage 51.485
SRR8316899Complete white stage 122.531
SRR8316903Complete white stage 91.761
SRR8316902Silver flowering stage61.749
SRR8316904Silver flowering stage73.935
SRR8316905Silver flowering stage33.113
SRR8316906Gold flowering stage 75.523
SRR8316907Gold flowering stage 94.587
SRR8316908Gold flowering stage 81.026
SRP132670SRR6706286Control69.304
SRR6706287Light intensity 50%70.422
SRR6706288Light intensity 20%71.785
CNP0000432CNS0095592Slightly white alabastrum(diploid) 169.407
CNS0095593Slightly white alabastrum(diploid) 270.394
CNS0095594Slightly white alabastrum(diploid) 358.084
CNS0095595Whole white alabastrum(diploid) 297.557
CNS0095596Whole white alabastrum(diploid) 393.126
CNS0095597Whole white alabastrum(diploid) 4128.445
CNS0095598Silvery flower (diploied) 1109.180
CNS0095599Silvery flower (diploied) 2134.657
CNS0095600Silvery flower (diploied) 3101.318
CNS0095601Golden flower (diploid) 168.070
CNS0095602Golden flower (diploid) 290.735
CNS0095603Golden flower (diploid) 390.620
CNS0095604Slightly white alabastrum(tetraploid) 169.653
CNS0095605Slightly white alabastrum(tetraploid) 273.824
CNS0095606Slightly white alabastrum(tetraploid) 363.787
CNS0095607Whole white alabastrum(tetraploid) 1120.871
CNS0095608Whole white alabastrum(tetraploid) 2145.851
CNS0095609Whole white alabastrum(tetraploid) 363.557
CNS0095610Silvery flower (tetraploid) 1130.495
CNS0095611Silvery flower (tetraploid) 265.751
CNS0095612Silvery flower (tetraploid) 353.830
CNS0095613Golden flower (tetraploid) 1105.033
CNS0095614Golden flower (tetraploid) 281.496
CNS0095615Golden flower (tetraploid) 377.753
CRA001975CRR073297Stem 131.039
CRR073298Stem 226.583
CRR073299Stem 322.837
CRR073300Leaf 162.825
CRR073301Leaf 245.876
CRR073302Leaf 339.251
CRR073303Juvenile bud 172.212
CRR073304Juvenile bud 255.783
CRR073305Juvenile bud 358.910
CRR073306Third green 156.685
CRR073307Third green 267.949
CRR073308Third green 367.085
CRR073309Second white 126.242
CRR073310Second white 233.924
CRR073311Second white 328.158
CRR073312Silver flowering 136.353
CRR073313Silver flowering 235.269
CRR073314Silver flowering 343.746
CRR073315Gold flowering 197.070
CRR073316Gold flowering 2110.997
CRR073317Gold flowering 397.029
CRR073318Tawny withering 183.798
CRR073319Tawny withering 2164.860
CRR073320Tawny withering 379.511