Detail information of GWHGAAZE014266


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010266504.12.86946E-94PREDICTED: zinc-finger homeodomain protein 1-like [Nelumbo nucifera]
Swissprottr|Q6YXH5|ZHD1_ORYSJ1E-77Zinc-finger homeodomain protein 1
trEMBLtr|A0A059BKP6|A0A059BKP6_EUCGR8E-88Uncharacterized protein {ECO:0000313|EMBL:KCW66609.1}
TAIR10AT4G24660.19E-57homeobox protein 22

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene91958659196563-
GWHAAZE00000004mRNA91958659196563-
GWHAAZE00000004exon91958659196563-
GWHAAZE00000004CDS91958659196563-
Transcript Sequence

Network for GWHGAAZE014266

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04770.13ZF-HD_dimer47995.40E-29
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors Familyzf-HD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.761
SRR3591706second leaf40.957
SRR3591707mature leaf44.000
SRR3591708Shoot apex66.220
SRR3591709Stem15.187
SRR3591710White floral bud6.470
SRR3591711White flower10.844
SRR3591712Green floral bud4.104
SRR3591713Yellow flower1.367
SRP173429 SRR8316895Juvenile bud stage 8.832
SRR8316896Juvenile bud stage 6.055
SRR8316897Juvenile bud stage 2.001
SRR8316894Third green stage 1.135
SRR8316900Third green stage 0.975
SRR8316901Third green stage 1.599
SRR8316898Complete white stage 0.092
SRR8316899Complete white stage 7.857
SRR8316903Complete white stage 1.699
SRR8316902Silver flowering stage0.503
SRR8316904Silver flowering stage0.314
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.216
SRR8316907Gold flowering stage 0.410
SRR8316908Gold flowering stage 0.440
SRP132670SRR6706286Control3.882
SRR6706287Light intensity 50%2.773
SRR6706288Light intensity 20%3.193
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.403
CNS0095593Slightly white alabastrum(diploid) 210.062
CNS0095594Slightly white alabastrum(diploid) 39.339
CNS0095595Whole white alabastrum(diploid) 28.315
CNS0095596Whole white alabastrum(diploid) 31.619
CNS0095597Whole white alabastrum(diploid) 47.670
CNS0095598Silvery flower (diploied) 135.255
CNS0095599Silvery flower (diploied) 220.190
CNS0095600Silvery flower (diploied) 34.800
CNS0095601Golden flower (diploid) 129.606
CNS0095602Golden flower (diploid) 212.801
CNS0095603Golden flower (diploid) 314.064
CNS0095604Slightly white alabastrum(tetraploid) 17.110
CNS0095605Slightly white alabastrum(tetraploid) 27.023
CNS0095606Slightly white alabastrum(tetraploid) 39.333
CNS0095607Whole white alabastrum(tetraploid) 16.137
CNS0095608Whole white alabastrum(tetraploid) 22.347
CNS0095609Whole white alabastrum(tetraploid) 31.360
CNS0095610Silvery flower (tetraploid) 11.311
CNS0095611Silvery flower (tetraploid) 24.977
CNS0095612Silvery flower (tetraploid) 32.505
CNS0095613Golden flower (tetraploid) 10.645
CNS0095614Golden flower (tetraploid) 21.221
CNS0095615Golden flower (tetraploid) 30.066
CRA001975CRR073297Stem 113.274
CRR073298Stem 211.696
CRR073299Stem 328.165
CRR073300Leaf 10.771
CRR073301Leaf 23.210
CRR073302Leaf 31.451
CRR073303Juvenile bud 10.934
CRR073304Juvenile bud 20.475
CRR073305Juvenile bud 31.005
CRR073306Third green 10.129
CRR073307Third green 20.210
CRR073308Third green 30.875
CRR073309Second white 10.020
CRR073310Second white 20.192
CRR073311Second white 30.070
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.348
CRR073314Silver flowering 30.091
CRR073315Gold flowering 157.605
CRR073316Gold flowering 256.537
CRR073317Gold flowering 349.219
CRR073318Tawny withering 120.029
CRR073319Tawny withering 223.638
CRR073320Tawny withering 319.643