Detail information of GWHGAAZE014262


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrADK93079.11.2009E-12714-3-3f protein [Gossypium hirsutum]
Swissprottr|P93207|14310_SOLLC6E-12514-3-3 protein 10
trEMBLtr|D9Z6D3|D9Z6D3_GOSHI4E-12814-3-3f protein {ECO:0000313|EMBL:ADK93079.1}
TAIR10AT5G65430.13E-96general regulatory factor 8

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene90284329032381+
GWHAAZE00000004mRNA90284329032381+
GWHAAZE00000004exon90284329028929+
GWHAAZE00000004exon90321029032218+
GWHAAZE00000004exon90323619032381+
GWHAAZE00000004CDS90284329028929+
GWHAAZE00000004CDS90321029032218+
GWHAAZE00000004CDS90323619032381+
Transcript Sequence

Network for GWHGAAZE014262

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00244.212014/3/3171663.30E-56
PF00244.212014/3/31642014.80E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06630YWHAE MAPK signaling pathway - yeast map04011
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
PI3K-Akt signaling pathwaymap04151
Cell cyclemap04110
Oocyte meiosismap04114
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0019904molecular_functionprotein domain specific binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf222.015
SRR3591706second leaf147.829
SRR3591707mature leaf128.986
SRR3591708Shoot apex222.685
SRR3591709Stem196.773
SRR3591710White floral bud161.591
SRR3591711White flower205.076
SRR3591712Green floral bud192.285
SRR3591713Yellow flower189.364
SRP173429 SRR8316895Juvenile bud stage 97.505
SRR8316896Juvenile bud stage 131.289
SRR8316897Juvenile bud stage 71.386
SRR8316894Third green stage 63.650
SRR8316900Third green stage 172.035
SRR8316901Third green stage 168.438
SRR8316898Complete white stage 99.139
SRR8316899Complete white stage 315.507
SRR8316903Complete white stage 145.794
SRR8316902Silver flowering stage56.444
SRR8316904Silver flowering stage80.797
SRR8316905Silver flowering stage46.072
SRR8316906Gold flowering stage 158.030
SRR8316907Gold flowering stage 146.447
SRR8316908Gold flowering stage 158.782
SRP132670SRR6706286Control319.152
SRR6706287Light intensity 50%281.865
SRR6706288Light intensity 20%299.449
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1125.770
CNS0095593Slightly white alabastrum(diploid) 2147.065
CNS0095594Slightly white alabastrum(diploid) 3101.181
CNS0095595Whole white alabastrum(diploid) 2117.924
CNS0095596Whole white alabastrum(diploid) 3109.882
CNS0095597Whole white alabastrum(diploid) 4115.774
CNS0095598Silvery flower (diploied) 1145.012
CNS0095599Silvery flower (diploied) 2133.474
CNS0095600Silvery flower (diploied) 3237.963
CNS0095601Golden flower (diploid) 1138.961
CNS0095602Golden flower (diploid) 2232.024
CNS0095603Golden flower (diploid) 3233.175
CNS0095604Slightly white alabastrum(tetraploid) 1160.605
CNS0095605Slightly white alabastrum(tetraploid) 2134.661
CNS0095606Slightly white alabastrum(tetraploid) 3255.827
CNS0095607Whole white alabastrum(tetraploid) 195.755
CNS0095608Whole white alabastrum(tetraploid) 276.426
CNS0095609Whole white alabastrum(tetraploid) 3167.161
CNS0095610Silvery flower (tetraploid) 1226.258
CNS0095611Silvery flower (tetraploid) 2299.665
CNS0095612Silvery flower (tetraploid) 3246.436
CNS0095613Golden flower (tetraploid) 1171.514
CNS0095614Golden flower (tetraploid) 2217.840
CNS0095615Golden flower (tetraploid) 3292.644
CRA001975CRR073297Stem 1218.478
CRR073298Stem 2217.254
CRR073299Stem 3279.250
CRR073300Leaf 1249.343
CRR073301Leaf 2271.391
CRR073302Leaf 3318.682
CRR073303Juvenile bud 1315.637
CRR073304Juvenile bud 2287.500
CRR073305Juvenile bud 3312.475
CRR073306Third green 1143.406
CRR073307Third green 2167.953
CRR073308Third green 3148.897
CRR073309Second white 1209.087
CRR073310Second white 2145.873
CRR073311Second white 395.715
CRR073312Silver flowering 190.933
CRR073313Silver flowering 2109.475
CRR073314Silver flowering 379.710
CRR073315Gold flowering 1232.804
CRR073316Gold flowering 2238.476
CRR073317Gold flowering 3296.315
CRR073318Tawny withering 1348.676
CRR073319Tawny withering 2266.683
CRR073320Tawny withering 3329.414