Detail information of GWHGAAZE014010


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP38473.10hypothetical protein JCGZ_04398 [Jatropha curcas]
Swissprottr|Q8L7R3|LPCT1_ARATH0Lysophospholipid acyltransferase LPEAT1
trEMBLtr|A0A067KU10|A0A067KU10_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP38473.1}
TAIR10AT1G80950.14E-137Phospholipid/glycerol acyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene43195584325528-
GWHAAZE00000004mRNA43195584325528-
GWHAAZE00000004exon43249984325528-
GWHAAZE00000004exon43243214324419-
GWHAAZE00000004exon43241664324203-
GWHAAZE00000004exon43232564323326-
GWHAAZE00000004exon43218374321905-
GWHAAZE00000004exon43213964321529-
GWHAAZE00000004exon43208204320960-
GWHAAZE00000004exon43195584319992-
GWHAAZE00000004CDS43249984325528-
GWHAAZE00000004CDS43243214324419-
GWHAAZE00000004CDS43241664324203-
GWHAAZE00000004CDS43232564323326-
GWHAAZE00000004CDS43218374321905-
GWHAAZE00000004CDS43213964321529-
GWHAAZE00000004CDS43208204320960-
GWHAAZE00000004CDS43198854319992-
GWHAAZE00000004three_prime_UTR43195584319884-
Transcript Sequence

Network for GWHGAAZE014010

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01553.22Acyltransferase1812963.80E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13510LPCAT1_2 Metabolic pathways map01100
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565

Gene Ontology

GO term OntologyName
GO:0016746molecular_functiontransferase activity, transferring acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.963
SRR3591706second leaf13.698
SRR3591707mature leaf12.375
SRR3591708Shoot apex17.975
SRR3591709Stem28.269
SRR3591710White floral bud16.426
SRR3591711White flower16.407
SRR3591712Green floral bud14.735
SRR3591713Yellow flower17.971
SRP173429 SRR8316895Juvenile bud stage 16.250
SRR8316896Juvenile bud stage 22.655
SRR8316897Juvenile bud stage 8.619
SRR8316894Third green stage 8.445
SRR8316900Third green stage 23.910
SRR8316901Third green stage 22.387
SRR8316898Complete white stage 10.136
SRR8316899Complete white stage 25.157
SRR8316903Complete white stage 22.087
SRR8316902Silver flowering stage12.140
SRR8316904Silver flowering stage16.878
SRR8316905Silver flowering stage7.994
SRR8316906Gold flowering stage 26.979
SRR8316907Gold flowering stage 27.871
SRR8316908Gold flowering stage 26.025
SRP132670SRR6706286Control14.711
SRR6706287Light intensity 50%16.372
SRR6706288Light intensity 20%18.320
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.115
CNS0095593Slightly white alabastrum(diploid) 217.181
CNS0095594Slightly white alabastrum(diploid) 316.205
CNS0095595Whole white alabastrum(diploid) 214.291
CNS0095596Whole white alabastrum(diploid) 310.820
CNS0095597Whole white alabastrum(diploid) 412.737
CNS0095598Silvery flower (diploied) 119.611
CNS0095599Silvery flower (diploied) 213.044
CNS0095600Silvery flower (diploied) 315.393
CNS0095601Golden flower (diploid) 114.935
CNS0095602Golden flower (diploid) 217.336
CNS0095603Golden flower (diploid) 316.035
CNS0095604Slightly white alabastrum(tetraploid) 114.549
CNS0095605Slightly white alabastrum(tetraploid) 210.604
CNS0095606Slightly white alabastrum(tetraploid) 319.104
CNS0095607Whole white alabastrum(tetraploid) 111.520
CNS0095608Whole white alabastrum(tetraploid) 210.133
CNS0095609Whole white alabastrum(tetraploid) 314.495
CNS0095610Silvery flower (tetraploid) 116.896
CNS0095611Silvery flower (tetraploid) 217.261
CNS0095612Silvery flower (tetraploid) 318.003
CNS0095613Golden flower (tetraploid) 115.886
CNS0095614Golden flower (tetraploid) 215.562
CNS0095615Golden flower (tetraploid) 314.190
CRA001975CRR073297Stem 112.723
CRR073298Stem 213.160
CRR073299Stem 36.977
CRR073300Leaf 115.021
CRR073301Leaf 214.710
CRR073302Leaf 38.846
CRR073303Juvenile bud 110.466
CRR073304Juvenile bud 28.493
CRR073305Juvenile bud 312.407
CRR073306Third green 13.562
CRR073307Third green 23.755
CRR073308Third green 34.269
CRR073309Second white 15.733
CRR073310Second white 23.032
CRR073311Second white 34.369
CRR073312Silver flowering 13.110
CRR073313Silver flowering 24.491
CRR073314Silver flowering 33.315
CRR073315Gold flowering 12.380
CRR073316Gold flowering 23.899
CRR073317Gold flowering 32.388
CRR073318Tawny withering 17.962
CRR073319Tawny withering 210.641
CRR073320Tawny withering 38.765