Gene detail

Detail information of GWHGAAZE013950

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002281033.1	0	PREDICTED: BEL1-like homeodomain protein 11 [Vitis vinifera]
Swissprot	tr\|Q1PFD1\|BLH11_ARATH	1E-97	BEL1-like homeodomain protein 11
trEMBL	tr\|E0CQI9\|E0CQI9_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI19758.3}
TAIR10	AT1G75430.1	6E-81	BEL1-like homeodomain 11

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	3374984	3376807	+
GWHAAZE00000004	mRNA	3374984	3376807	+
GWHAAZE00000004	exon	3374984	3375769	+
GWHAAZE00000004	exon	3376090	3376472	+
GWHAAZE00000004	exon	3376570	3376630	+
GWHAAZE00000004	exon	3376715	3376807	+
GWHAAZE00000004	CDS	3374984	3375769	+
GWHAAZE00000004	CDS	3376090	3376472	+
GWHAAZE00000004	CDS	3376570	3376630	+
GWHAAZE00000004	CDS	3376715	3376807	+

Transcript Sequence
>GWHTAAZE013964 ATGGTTTCCCAAGGCTCACCCCCAAATCCAAATTCACACAATCTCCACCACTTTCTAATCTCAGATTCCAATTCTCGTCCAAATCAATTTGTAAACCAACATTTCCATTCCCACGTAGCTGGTAGCTCGTATCCTCAGTCACATGGTTTATTGCCGAGCATTCAGTCTCTGGGAGAGAGAATTTCAAGATCAATTGATCTTGTCCATGCTCCATTAGTGACAGAGGAATCTGAGTTGAACCATAGTAGACATTTTCTTGGCGCATCAAATGAGAGTAATAATCACCCACAAGAGAGACTCTCATTATCTCTAGATTCTGGGATGCTAGTTCCTCCAGTCCAATACAGGCAAAGATCTTTGATCCGAAATGTCATTAATCCCAGTTACTTATTTTCTGGTGAAGAAACAAGGGAAGTTTGTAATGTGGGATTGGACCGACTCAGCGATAATTATTCATTTACAGTTACTGGTATTGCTTCATCTTCAACACCGTTTGATCATTCTAGTTCCAACTTTAATGGAACAGAACCTTATGGTATTGGTGTCAGTAATTCCAAATATTTGAAAGCAGCTCAGTCCCTTCTTGAAGAAGTAGTTAGTATTGGGGGCAAGGAAGTTGAGTCTAGCAATAAGAAATATGTCAGAAGATTATCTCGCGACGATAAAAGAGGTTCTCTAAGACTTCGTTTCGAACTAAAAGCAGAGTTGTGCCATATTGAGTTATTATCCATGGAGAAACATGAACTTCAAGCTAGAATTGCTAACCTCATTGGCCTGCTGGAGGAGATTGAGAGGAGGTTTGAGCAATACCATTGTCATATGGAAGAGATGGTTTCATCATTTGAAGTGATAGCAGGATTAGGAGCAGGGAAGTCTTACACTGCTCTTGCTCTTCAAGCCATGTCAAGGCATTTTTGCACCTTAAGAGATGCAATTATATCACAAATTTATGAGACGAGACGAAAACTTTCACTAGAAATGCCAAGAATCAGTACGGGTTTGTCGCAAATGAGCTTGTTTGATCAAGAGACTGCTAGACATAATCGCATTGCTCTTCAACAGCTTGGGATGATCCAAAGCCCGCGTCAAACATGGAGACCAATCAGAGGATTGCCGGAGACTTCTGTTGCAATTCTTCGGTCTTGGCTTTTTGAACACTTTCTCAACCCTTATCCAAATGATAGTGAAAAACTTGTGCTGGCGTCACAAACAGGCCTGACCAAGAACCAAGTATCGAATTGGTTCATAAATGCTCGAGTGAGGCTGTGGAAGCCGATGATCGAGGAGATGTACAAAGAAGAGTTTGAAGGCTTAGTCGATTGA

Network for GWHGAAZE013950

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07526.12	POX	182	312	1.90E-36
PF05920.12	Homeobox_KN	382	421	9.10E-16

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	HB-BELL

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.316
	SRR3591706	second leaf	0.098
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	1.228
	SRR3591709	Stem	0.186
	SRR3591710	White floral bud	0.106
	SRR3591711	White flower	0.056
	SRR3591712	Green floral bud	0.080
	SRR3591713	Yellow flower	0.220
SRP173429	SRR8316895	Juvenile bud stage	0.455
	SRR8316896	Juvenile bud stage	0.772
	SRR8316897	Juvenile bud stage	0.609
	SRR8316894	Third green stage	0.074
	SRR8316900	Third green stage	0.455
	SRR8316901	Third green stage	0.269
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.065
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.052
	SRR8316905	Silver flowering stage	0.052
	SRR8316906	Gold flowering stage	0.077
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.002
SRP132670	SRR6706286	Control	0.001
	SRR6706287	Light intensity 50%	0.095
	SRR6706288	Light intensity 20%	0.024
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.479
	CNS0095593	Slightly white alabastrum(diploid) 2	0.515
	CNS0095594	Slightly white alabastrum(diploid) 3	0.691
	CNS0095595	Whole white alabastrum(diploid) 2	0.138
	CNS0095596	Whole white alabastrum(diploid) 3	0.511
	CNS0095597	Whole white alabastrum(diploid) 4	0.142
	CNS0095598	Silvery flower (diploied) 1	0.081
	CNS0095599	Silvery flower (diploied) 2	0.362
	CNS0095600	Silvery flower (diploied) 3	0.048
	CNS0095601	Golden flower (diploid) 1	0.252
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.030
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.276
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.264
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.092
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.212
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.241
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.060
	CNS0095610	Silvery flower (tetraploid) 1	0.049
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.051
	CNS0095613	Golden flower (tetraploid) 1	0.054
	CNS0095614	Golden flower (tetraploid) 2	0.050
	CNS0095615	Golden flower (tetraploid) 3	0.085
CRA001975	CRR073297	Stem 1	0.802
	CRR073298	Stem 2	0.793
	CRR073299	Stem 3	0.309
	CRR073300	Leaf 1	0.183
	CRR073301	Leaf 2	0.096
	CRR073302	Leaf 3	0.041
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.027
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.002
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.140
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.055
	CRR073314	Silver flowering 3	0.466
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.035
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.107