Gene detail

Detail information of GWHGAAZE013880

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	BAJ53104.1	2.0881E-164	JHL20J20.11 [Jatropha curcas]
trEMBL	tr\|E6NTZ4\|E6NTZ4_JATCU	8E-165	Uncharacterized protein {ECO:0000313\|EMBL:KDP36894.1}
TAIR10	AT5G42150.1	6E-119	Glutathione S-transferase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	2104196	2107800	-
GWHAAZE00000004	mRNA	2104196	2107800	-
GWHAAZE00000004	exon	2104196	2104356	-
GWHAAZE00000004	exon	2104604	2104771	-
GWHAAZE00000004	exon	2105432	2105526	-
GWHAAZE00000004	exon	2106208	2106295	-
GWHAAZE00000004	exon	2106615	2106749	-
GWHAAZE00000004	exon	2107428	2107800	-
GWHAAZE00000004	CDS	2107428	2107800	-
GWHAAZE00000004	CDS	2106615	2106749	-
GWHAAZE00000004	CDS	2106208	2106295	-
GWHAAZE00000004	CDS	2105432	2105526	-
GWHAAZE00000004	CDS	2104604	2104771	-
GWHAAZE00000004	CDS	2104196	2104356	-

Transcript Sequence
>GWHTAAZE013894 ATGAAGAGAATTAGCGGAATCGCCGCCATAGCAAACAAAGCTATTGAAGGCTTCACCGCCGGCACAACCATCACTGGTCAACGGTTGCAACAGGCCTCCCGTTACACCAATAGCTGCAATTCCTCCTCCTTTGCTAAGTCTCCCTTATTCTCGCGTTGCAGCCTCGTTGATCACTTAGGGTTAGGGCACTCTACTCACTCCTCCTTCGCCGCCGCTCACGGCCTCTCCCCCAAAATGTTCTTCTCAGCCACCGCCGCCTCGTCACTCGCTGAAGAAGTGCAAGCAACTGAACCACCGCACTACACCAAGTTCCTCCCCAAAGACGTCGTTCTTTATCAATATGAAGCTTGTCCTTTCTGCAACAAAGTTAAAGCATTCCTGGACTACTATGATATTCCATACAAAATTTTGGAGGTCAATCCCATCAACAAAAAGGAAATCAAATGGTCTGACTACAAGAAGGTACCAATATTGCTGGTAGATGGCAAGCAGATGGTTGACTCATCAGATATCATCAATAAATTGTTCCAAAGGATTCATCCTGAGATATCTGTCAACTCTGTCCCTGATGGTGATGAAGATATGAAGTGGCGCGGGTGGGTGGACAATCACTTGGTGCATGTCTTATCACCAAACATCTATCGAACTCCCACCGAGGCTCTCGAGTCATTCGATTACATTACAAGCCACGGTAACTTCAGTTTCAGTGAAAGGATCGTAGCCAAGTACGCAGGAGCTGCAGCTATGTACTTTGTGTCAAAGAAATTGAAGAAAAAACATCATATCACAGATGAGCGTGCAGCCTTGTATGAAGCTGCTGAGACATGGGTAGATGCTCTGAAGGGTCGTGAATTCCTTGGTGGGTCAAAACCTAATTTAGCTGATCTTGCTGTATTTGGCGTTTTGAGACCCATCCGTCACCTCAAGTCAGGTAGAGATATGGTGGAGAACACACGCATTGGTGAATGGTACACTCAGATGGAGAGCGCAGTAGGAGTGTCTTCAAAGATCAAGGAATGA

Network for GWHGAAZE013880

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13417.7	GST_N_3	111	178	3.80E-12

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05309	PTGES2	Metabolic pathways	map01100
K05309	PTGES2	Arachidonic acid metabolism	map00590

Gene Ontology

GO term	Ontology	Name
GO:0045454	biological_process	cell redox homeostasis
GO:0009055	molecular_function	electron transfer activity
GO:0015035	molecular_function	protein disulfide oxidoreductase activity
GO:0005515	molecular_function	protein binding
GO:0050220	molecular_function	prostaglandin-E synthase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	13.840
	SRR3591706	second leaf	12.210
	SRR3591707	mature leaf	17.872
	SRR3591708	Shoot apex	14.704
	SRR3591709	Stem	17.189
	SRR3591710	White floral bud	26.085
	SRR3591711	White flower	35.836
	SRR3591712	Green floral bud	26.685
	SRR3591713	Yellow flower	25.163
SRP173429	SRR8316895	Juvenile bud stage	17.308
	SRR8316896	Juvenile bud stage	23.998
	SRR8316897	Juvenile bud stage	13.980
	SRR8316894	Third green stage	10.387
	SRR8316900	Third green stage	23.607
	SRR8316901	Third green stage	25.068
	SRR8316898	Complete white stage	8.105
	SRR8316899	Complete white stage	28.254
	SRR8316903	Complete white stage	10.587
	SRR8316902	Silver flowering stage	8.281
	SRR8316904	Silver flowering stage	12.527
	SRR8316905	Silver flowering stage	4.938
	SRR8316906	Gold flowering stage	16.124
	SRR8316907	Gold flowering stage	18.837
	SRR8316908	Gold flowering stage	18.968
SRP132670	SRR6706286	Control	32.406
	SRR6706287	Light intensity 50%	30.671
	SRR6706288	Light intensity 20%	31.175
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	18.942
	CNS0095593	Slightly white alabastrum(diploid) 2	23.669
	CNS0095594	Slightly white alabastrum(diploid) 3	24.590
	CNS0095595	Whole white alabastrum(diploid) 2	18.514
	CNS0095596	Whole white alabastrum(diploid) 3	13.682
	CNS0095597	Whole white alabastrum(diploid) 4	13.739
	CNS0095598	Silvery flower (diploied) 1	24.204
	CNS0095599	Silvery flower (diploied) 2	23.079
	CNS0095600	Silvery flower (diploied) 3	27.630
	CNS0095601	Golden flower (diploid) 1	23.861
	CNS0095602	Golden flower (diploid) 2	23.976
	CNS0095603	Golden flower (diploid) 3	24.964
	CNS0095604	Slightly white alabastrum(tetraploid) 1	20.976
	CNS0095605	Slightly white alabastrum(tetraploid) 2	18.244
	CNS0095606	Slightly white alabastrum(tetraploid) 3	27.609
	CNS0095607	Whole white alabastrum(tetraploid) 1	12.778
	CNS0095608	Whole white alabastrum(tetraploid) 2	10.456
	CNS0095609	Whole white alabastrum(tetraploid) 3	19.414
	CNS0095610	Silvery flower (tetraploid) 1	29.666
	CNS0095611	Silvery flower (tetraploid) 2	31.058
	CNS0095612	Silvery flower (tetraploid) 3	27.071
	CNS0095613	Golden flower (tetraploid) 1	21.250
	CNS0095614	Golden flower (tetraploid) 2	27.983
	CNS0095615	Golden flower (tetraploid) 3	13.392
CRA001975	CRR073297	Stem 1	28.874
	CRR073298	Stem 2	30.955
	CRR073299	Stem 3	28.622
	CRR073300	Leaf 1	34.710
	CRR073301	Leaf 2	41.554
	CRR073302	Leaf 3	33.220
	CRR073303	Juvenile bud 1	37.104
	CRR073304	Juvenile bud 2	26.202
	CRR073305	Juvenile bud 3	35.766
	CRR073306	Third green 1	6.121
	CRR073307	Third green 2	5.510
	CRR073308	Third green 3	7.809
	CRR073309	Second white 1	11.687
	CRR073310	Second white 2	14.017
	CRR073311	Second white 3	9.454
	CRR073312	Silver flowering 1	8.701
	CRR073313	Silver flowering 2	8.886
	CRR073314	Silver flowering 3	5.893
	CRR073315	Gold flowering 1	24.872
	CRR073316	Gold flowering 2	22.330
	CRR073317	Gold flowering 3	20.405
	CRR073318	Tawny withering 1	24.740
	CRR073319	Tawny withering 2	25.912
	CRR073320	Tawny withering 3	28.408