Detail information of GWHGAAZE013872


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011083448.13.44353E-98PREDICTED: probable cinnamyl alcohol dehydrogenase 6 [Sesamum indicum]
Swissprottr|Q7XWU3|CADH6_ORYSJ7E-82Probable cinnamyl alcohol dehydrogenase 6
trEMBLtr|A0A022PPF2|A0A022PPF2_ERYGU3E-98Uncharacterized protein {ECO:0000313|EMBL:EYU17576.1}
TAIR10AT2G21730.16E-54cinnamyl alcohol dehydrogenase homolog 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene18722111873411-
GWHAAZE00000004mRNA18722111873411-
GWHAAZE00000004exon18731961873411-
GWHAAZE00000004exon18725321872685-
GWHAAZE00000004exon18722111872419-
GWHAAZE00000004CDS18731961873411-
GWHAAZE00000004CDS18725321872685-
GWHAAZE00000004CDS18722111872419-
Transcript Sequence

Network for GWHGAAZE013872

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00107.27ADH_zinc_N751452.10E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00083CAD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf29.263
SRR3591706second leaf80.942
SRR3591707mature leaf22.801
SRR3591708Shoot apex82.454
SRR3591709Stem9.049
SRR3591710White floral bud12.353
SRR3591711White flower9.759
SRR3591712Green floral bud30.727
SRR3591713Yellow flower0.959
SRP173429 SRR8316895Juvenile bud stage 42.276
SRR8316896Juvenile bud stage 46.248
SRR8316897Juvenile bud stage 14.981
SRR8316894Third green stage 18.083
SRR8316900Third green stage 46.371
SRR8316901Third green stage 38.131
SRR8316898Complete white stage 1.386
SRR8316899Complete white stage 18.981
SRR8316903Complete white stage 2.314
SRR8316902Silver flowering stage87.468
SRR8316904Silver flowering stage65.513
SRR8316905Silver flowering stage56.286
SRR8316906Gold flowering stage 300.769
SRR8316907Gold flowering stage 246.768
SRR8316908Gold flowering stage 200.698
SRP132670SRR6706286Control49.550
SRR6706287Light intensity 50%48.020
SRR6706288Light intensity 20%52.848
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.323
CNS0095593Slightly white alabastrum(diploid) 229.521
CNS0095594Slightly white alabastrum(diploid) 331.137
CNS0095595Whole white alabastrum(diploid) 214.688
CNS0095596Whole white alabastrum(diploid) 310.789
CNS0095597Whole white alabastrum(diploid) 49.094
CNS0095598Silvery flower (diploied) 122.381
CNS0095599Silvery flower (diploied) 216.137
CNS0095600Silvery flower (diploied) 311.279
CNS0095601Golden flower (diploid) 115.749
CNS0095602Golden flower (diploid) 211.602
CNS0095603Golden flower (diploid) 312.071
CNS0095604Slightly white alabastrum(tetraploid) 129.331
CNS0095605Slightly white alabastrum(tetraploid) 212.204
CNS0095606Slightly white alabastrum(tetraploid) 376.104
CNS0095607Whole white alabastrum(tetraploid) 16.964
CNS0095608Whole white alabastrum(tetraploid) 23.257
CNS0095609Whole white alabastrum(tetraploid) 319.503
CNS0095610Silvery flower (tetraploid) 15.174
CNS0095611Silvery flower (tetraploid) 25.346
CNS0095612Silvery flower (tetraploid) 32.822
CNS0095613Golden flower (tetraploid) 12.574
CNS0095614Golden flower (tetraploid) 23.737
CNS0095615Golden flower (tetraploid) 31.916
CRA001975CRR073297Stem 152.354
CRR073298Stem 254.339
CRR073299Stem 358.471
CRR073300Leaf 127.900
CRR073301Leaf 243.667
CRR073302Leaf 337.405
CRR073303Juvenile bud 19.823
CRR073304Juvenile bud 21.377
CRR073305Juvenile bud 312.201
CRR073306Third green 128.232
CRR073307Third green 213.211
CRR073308Third green 320.707
CRR073309Second white 168.009
CRR073310Second white 2108.553
CRR073311Second white 3118.690
CRR073312Silver flowering 181.122
CRR073313Silver flowering 259.979
CRR073314Silver flowering 332.109
CRR073315Gold flowering 123.716
CRR073316Gold flowering 213.293
CRR073317Gold flowering 324.055
CRR073318Tawny withering 128.439
CRR073319Tawny withering 229.576
CRR073320Tawny withering 35.857