Detail information of GWHGAAZE013727


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002270865.20PREDICTED: calmodulin-binding transcription activator 4 isoform X2 [Vitis vinifera]
Swissprottr|Q9FYG2|CMTA4_ARATH0Calmodulin-binding transcription activator 4
trEMBLtr|D7TB03|D7TB03_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI27676.3}
TAIR10AT1G67310.12E-179Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene107105481107113970-
GWHAAZE00000003mRNA107105481107113970-
GWHAAZE00000003exon107113368107113970-
GWHAAZE00000003exon107111848107111936-
GWHAAZE00000003exon107111512107111557-
GWHAAZE00000003exon107110716107111157-
GWHAAZE00000003exon107109961107110112-
GWHAAZE00000003exon107109308107109398-
GWHAAZE00000003exon107108995107109218-
GWHAAZE00000003exon107108165107108835-
GWHAAZE00000003exon107108011107108085-
GWHAAZE00000003exon107106923107107502-
GWHAAZE00000003exon107105838107106134-
GWHAAZE00000003exon107105481107105730-
GWHAAZE00000003CDS107113368107113970-
GWHAAZE00000003CDS107111848107111936-
GWHAAZE00000003CDS107111512107111557-
GWHAAZE00000003CDS107110716107111157-
GWHAAZE00000003CDS107109961107110112-
GWHAAZE00000003CDS107109308107109398-
GWHAAZE00000003CDS107108995107109218-
GWHAAZE00000003CDS107108165107108835-
GWHAAZE00000003CDS107108011107108085-
GWHAAZE00000003CDS107106923107107502-
GWHAAZE00000003CDS107105838107106134-
GWHAAZE00000003CDS107105632107105730-
GWHAAZE00000003three_prime_UTR107105481107105631-
Transcript Sequence

Network for GWHGAAZE013727

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP70382032.60E-75
PF03859.17CG-12002435.90E-15
PF01833.25TIG5336165.30E-11
PF00612.28IQ9629800.044
PF00612.28IQ98510020.00091
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyCAMTA

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf39.735
SRR3591706second leaf27.527
SRR3591707mature leaf34.320
SRR3591708Shoot apex23.622
SRR3591709Stem30.157
SRR3591710White floral bud40.701
SRR3591711White flower42.253
SRR3591712Green floral bud36.297
SRR3591713Yellow flower64.444
SRP173429 SRR8316895Juvenile bud stage 17.813
SRR8316896Juvenile bud stage 24.823
SRR8316897Juvenile bud stage 9.597
SRR8316894Third green stage 11.481
SRR8316900Third green stage 32.362
SRR8316901Third green stage 28.370
SRR8316898Complete white stage 14.116
SRR8316899Complete white stage 34.707
SRR8316903Complete white stage 25.563
SRR8316902Silver flowering stage16.798
SRR8316904Silver flowering stage25.921
SRR8316905Silver flowering stage14.707
SRR8316906Gold flowering stage 45.361
SRR8316907Gold flowering stage 41.542
SRR8316908Gold flowering stage 41.199
SRP132670SRR6706286Control35.216
SRR6706287Light intensity 50%33.648
SRR6706288Light intensity 20%34.826
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.433
CNS0095593Slightly white alabastrum(diploid) 214.283
CNS0095594Slightly white alabastrum(diploid) 316.321
CNS0095595Whole white alabastrum(diploid) 215.738
CNS0095596Whole white alabastrum(diploid) 315.118
CNS0095597Whole white alabastrum(diploid) 417.058
CNS0095598Silvery flower (diploied) 129.739
CNS0095599Silvery flower (diploied) 220.035
CNS0095600Silvery flower (diploied) 340.579
CNS0095601Golden flower (diploid) 122.481
CNS0095602Golden flower (diploid) 254.757
CNS0095603Golden flower (diploid) 354.047
CNS0095604Slightly white alabastrum(tetraploid) 119.532
CNS0095605Slightly white alabastrum(tetraploid) 216.767
CNS0095606Slightly white alabastrum(tetraploid) 337.981
CNS0095607Whole white alabastrum(tetraploid) 116.894
CNS0095608Whole white alabastrum(tetraploid) 214.830
CNS0095609Whole white alabastrum(tetraploid) 332.070
CNS0095610Silvery flower (tetraploid) 142.051
CNS0095611Silvery flower (tetraploid) 235.138
CNS0095612Silvery flower (tetraploid) 332.706
CNS0095613Golden flower (tetraploid) 124.253
CNS0095614Golden flower (tetraploid) 236.489
CNS0095615Golden flower (tetraploid) 347.188
CRA001975CRR073297Stem 125.122
CRR073298Stem 222.741
CRR073299Stem 324.375
CRR073300Leaf 129.012
CRR073301Leaf 226.184
CRR073302Leaf 323.852
CRR073303Juvenile bud 123.090
CRR073304Juvenile bud 224.132
CRR073305Juvenile bud 329.389
CRR073306Third green 114.774
CRR073307Third green 213.134
CRR073308Third green 315.868
CRR073309Second white 119.778
CRR073310Second white 215.253
CRR073311Second white 316.971
CRR073312Silver flowering 141.004
CRR073313Silver flowering 259.245
CRR073314Silver flowering 346.866
CRR073315Gold flowering 110.211
CRR073316Gold flowering 219.249
CRR073317Gold flowering 314.535
CRR073318Tawny withering 116.037
CRR073319Tawny withering 212.782
CRR073320Tawny withering 317.096