Detail information of GWHGAAZE013632


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011071124.10PREDICTED: high affinity nitrate transporter 2.5 [Sesamum indicum]
Swissprottr|Q9LPV5|NRT25_ARATH0High affinity nitrate transporter 2.5
trEMBLtr|A0A061E862|A0A061E862_THECC0Nitrate transporter2.5 {ECO:0000313|EMBL:EOY00557.1}
TAIR10AT1G12940.10nitrate transporter2.5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene105581309105582954-
GWHAAZE00000003mRNA105581309105582954-
GWHAAZE00000003exon105581309105581675-
GWHAAZE00000003exon105581807105582954-
GWHAAZE00000003CDS105581807105582954-
GWHAAZE00000003CDS105581309105581675-
Transcript Sequence

Network for GWHGAAZE013632

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0065GO:0005887 integral component of plasma membrane GOslim:cellular_component
map04970 Salivary secretion
map04745 Phototransduction - fly
map04744 Phototransduction
map04971 Gastric acid secretion
map04925 Aldosterone synthesis and secretion
map04740 Olfactory transduction
map04713 Circadian entrainment
map04625 C-type lectin receptor signaling pathway
map04916 Melanogenesis
map04750 Inflammatory mediator regulation of TRP channels
map04270 Vascular smooth muscle contraction
map04924 Renin secretion
map04015 Rap1 signaling pathway
map04921 Oxytocin signaling pathway
map04720 Long-term potentiation
map04014 Ras signaling pathway
map04020 Calcium signaling pathway
map04722 Neurotrophin signaling pathway
map04371 Apelin signaling pathway
map04022 cGMP-PKG signaling pathway
map04912 GnRH signaling pathway
map04261 Adrenergic signaling in cardiomyocytes
map04915 Estrogen signaling pathway
map04728 Dopaminergic synapse
map00910 Nitrogen metabolism
map04024 cAMP signaling pathway
map04070 Phosphatidylinositol signaling system
map04922 Glucagon signaling pathway
map04218 Cellular senescence


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07690.17MFS_1464028.30E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02575NRT, narK, nrtP, nasA Nitrogen metabolism map00910

Gene Ontology

GO term OntologyName
GO:0055085biological_processtransmembrane transport
GO:0005887cellular_componentintegral component of plasma membrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.532
SRR3591706second leaf1.565
SRR3591707mature leaf22.907
SRR3591708Shoot apex0.588
SRR3591709Stem7.628
SRR3591710White floral bud1.592
SRR3591711White flower1.055
SRR3591712Green floral bud1.731
SRR3591713Yellow flower1.025
SRP173429 SRR8316895Juvenile bud stage 0.932
SRR8316896Juvenile bud stage 2.702
SRR8316897Juvenile bud stage 0.625
SRR8316894Third green stage 1.199
SRR8316900Third green stage 2.563
SRR8316901Third green stage 3.366
SRR8316898Complete white stage 4.708
SRR8316899Complete white stage 16.256
SRR8316903Complete white stage 5.249
SRR8316902Silver flowering stage1.337
SRR8316904Silver flowering stage2.583
SRR8316905Silver flowering stage0.949
SRR8316906Gold flowering stage 10.280
SRR8316907Gold flowering stage 5.681
SRR8316908Gold flowering stage 24.550
SRP132670SRR6706286Control6.889
SRR6706287Light intensity 50%7.650
SRR6706288Light intensity 20%5.147
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.824
CNS0095593Slightly white alabastrum(diploid) 26.721
CNS0095594Slightly white alabastrum(diploid) 32.996
CNS0095595Whole white alabastrum(diploid) 23.466
CNS0095596Whole white alabastrum(diploid) 30.048
CNS0095597Whole white alabastrum(diploid) 42.962
CNS0095598Silvery flower (diploied) 14.515
CNS0095599Silvery flower (diploied) 23.858
CNS0095600Silvery flower (diploied) 33.869
CNS0095601Golden flower (diploid) 14.299
CNS0095602Golden flower (diploid) 24.273
CNS0095603Golden flower (diploid) 34.790
CNS0095604Slightly white alabastrum(tetraploid) 10.552
CNS0095605Slightly white alabastrum(tetraploid) 20.089
CNS0095606Slightly white alabastrum(tetraploid) 32.441
CNS0095607Whole white alabastrum(tetraploid) 10.183
CNS0095608Whole white alabastrum(tetraploid) 20.241
CNS0095609Whole white alabastrum(tetraploid) 30.399
CNS0095610Silvery flower (tetraploid) 12.174
CNS0095611Silvery flower (tetraploid) 20.226
CNS0095612Silvery flower (tetraploid) 30.920
CNS0095613Golden flower (tetraploid) 12.432
CNS0095614Golden flower (tetraploid) 27.002
CNS0095615Golden flower (tetraploid) 30.490
CRA001975CRR073297Stem 10.819
CRR073298Stem 20.315
CRR073299Stem 30.377
CRR073300Leaf 11.060
CRR073301Leaf 20.636
CRR073302Leaf 30.889
CRR073303Juvenile bud 10.556
CRR073304Juvenile bud 21.102
CRR073305Juvenile bud 32.584
CRR073306Third green 10.441
CRR073307Third green 20.064
CRR073308Third green 30.429
CRR073309Second white 11.302
CRR073310Second white 21.715
CRR073311Second white 31.049
CRR073312Silver flowering 14.716
CRR073313Silver flowering 24.025
CRR073314Silver flowering 33.269
CRR073315Gold flowering 13.143
CRR073316Gold flowering 26.153
CRR073317Gold flowering 320.515
CRR073318Tawny withering 133.307
CRR073319Tawny withering 254.477
CRR073320Tawny withering 36.928