Detail information of GWHGAAZE013410


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277990.10PREDICTED: probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1 [Vitis vinifera]
Swissprottr|Q8VYP9|ICML1_ARATH0Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1
trEMBLtr|D7T9D3|D7T9D3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI27104.3}
TAIR10AT1G26120.13E-153alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene102249769102263771-
GWHAAZE00000003mRNA102249769102263771-
GWHAAZE00000003exon102263392102263771-
GWHAAZE00000003exon102259761102259837-
GWHAAZE00000003exon102259493102259562-
GWHAAZE00000003exon102259318102259404-
GWHAAZE00000003exon102258854102258928-
GWHAAZE00000003exon102258422102258562-
GWHAAZE00000003exon102258027102258092-
GWHAAZE00000003exon102257786102257929-
GWHAAZE00000003exon102250072102250162-
GWHAAZE00000003exon102249769102249930-
GWHAAZE00000003CDS102263392102263771-
GWHAAZE00000003CDS102259761102259837-
GWHAAZE00000003CDS102259493102259562-
GWHAAZE00000003CDS102259318102259404-
GWHAAZE00000003CDS102258854102258928-
GWHAAZE00000003CDS102258422102258562-
GWHAAZE00000003CDS102258027102258092-
GWHAAZE00000003CDS102257786102257929-
GWHAAZE00000003CDS102250072102250162-
GWHAAZE00000003CDS102249769102249930-
Transcript Sequence

Network for GWHGAAZE013410

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07859.14Abhydrolase_32293716.90E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15889PCME Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Terpenoid backbone biosynthesismap00900

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.798
SRR3591706second leaf10.132
SRR3591707mature leaf6.202
SRR3591708Shoot apex11.216
SRR3591709Stem15.492
SRR3591710White floral bud15.280
SRR3591711White flower13.049
SRR3591712Green floral bud19.501
SRR3591713Yellow flower15.620
SRP173429 SRR8316895Juvenile bud stage 5.613
SRR8316896Juvenile bud stage 12.505
SRR8316897Juvenile bud stage 5.011
SRR8316894Third green stage 5.338
SRR8316900Third green stage 15.972
SRR8316901Third green stage 15.211
SRR8316898Complete white stage 5.824
SRR8316899Complete white stage 12.561
SRR8316903Complete white stage 10.427
SRR8316902Silver flowering stage6.414
SRR8316904Silver flowering stage9.603
SRR8316905Silver flowering stage5.063
SRR8316906Gold flowering stage 17.917
SRR8316907Gold flowering stage 16.924
SRR8316908Gold flowering stage 17.663
SRP132670SRR6706286Control14.625
SRR6706287Light intensity 50%13.816
SRR6706288Light intensity 20%13.884
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.171
CNS0095593Slightly white alabastrum(diploid) 210.352
CNS0095594Slightly white alabastrum(diploid) 310.962
CNS0095595Whole white alabastrum(diploid) 214.314
CNS0095596Whole white alabastrum(diploid) 312.240
CNS0095597Whole white alabastrum(diploid) 414.869
CNS0095598Silvery flower (diploied) 16.749
CNS0095599Silvery flower (diploied) 25.267
CNS0095600Silvery flower (diploied) 310.399
CNS0095601Golden flower (diploid) 16.683
CNS0095602Golden flower (diploid) 211.167
CNS0095603Golden flower (diploid) 310.725
CNS0095604Slightly white alabastrum(tetraploid) 113.529
CNS0095605Slightly white alabastrum(tetraploid) 211.655
CNS0095606Slightly white alabastrum(tetraploid) 313.605
CNS0095607Whole white alabastrum(tetraploid) 117.302
CNS0095608Whole white alabastrum(tetraploid) 214.926
CNS0095609Whole white alabastrum(tetraploid) 314.959
CNS0095610Silvery flower (tetraploid) 113.589
CNS0095611Silvery flower (tetraploid) 28.191
CNS0095612Silvery flower (tetraploid) 311.452
CNS0095613Golden flower (tetraploid) 110.055
CNS0095614Golden flower (tetraploid) 211.242
CNS0095615Golden flower (tetraploid) 319.259
CRA001975CRR073297Stem 19.100
CRR073298Stem 29.439
CRR073299Stem 36.815
CRR073300Leaf 111.596
CRR073301Leaf 210.620
CRR073302Leaf 39.833
CRR073303Juvenile bud 110.738
CRR073304Juvenile bud 29.928
CRR073305Juvenile bud 37.636
CRR073306Third green 17.527
CRR073307Third green 26.848
CRR073308Third green 38.442
CRR073309Second white 110.817
CRR073310Second white 211.792
CRR073311Second white 312.525
CRR073312Silver flowering 112.832
CRR073313Silver flowering 210.646
CRR073314Silver flowering 311.379
CRR073315Gold flowering 16.749
CRR073316Gold flowering 27.204
CRR073317Gold flowering 35.714
CRR073318Tawny withering 112.697
CRR073319Tawny withering 29.790
CRR073320Tawny withering 310.763