Detail information of GWHGAAZE013359


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP00631.12.98872E-44unnamed protein product [Coffea canephora]
Swissprottr|Q5GHF7|IPT_HUMLU1E-37Adenylate isopentenyltransferase
trEMBLtr|A0A068TWK6|A0A068TWK6_COFCA1E-44Coffea canephora DH200=94 genomic scaffold, scaffold_5 {ECO:0000313|EMBL:CDP00631.1}
TAIR10AT1G68460.15E-21isopentenyltransferase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene101392486101392932-
GWHAAZE00000003mRNA101392486101392932-
GWHAAZE00000003exon101392610101392932-
GWHAAZE00000003exon101392486101392576-
GWHAAZE00000003CDS101392610101392932-
GWHAAZE00000003CDS101392486101392576-
Transcript Sequence

Network for GWHGAAZE013359

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01715.18IPPT1861.60E-05
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K10760IPT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Zeatin biosynthesismap00908

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.227
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud7.112
SRR3591711White flower8.234
SRR3591712Green floral bud7.438
SRR3591713Yellow flower1.154
SRP173429 SRR8316895Juvenile bud stage 2.154
SRR8316896Juvenile bud stage 6.369
SRR8316897Juvenile bud stage 0.521
SRR8316894Third green stage 1.737
SRR8316900Third green stage 7.394
SRR8316901Third green stage 7.996
SRR8316898Complete white stage 1.941
SRR8316899Complete white stage 2.151
SRR8316903Complete white stage 3.041
SRR8316902Silver flowering stage6.202
SRR8316904Silver flowering stage3.758
SRR8316905Silver flowering stage1.672
SRR8316906Gold flowering stage 3.343
SRR8316907Gold flowering stage 2.756
SRR8316908Gold flowering stage 3.100
SRP132670SRR6706286Control7.852
SRR6706287Light intensity 50%7.256
SRR6706288Light intensity 20%6.228
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.247
CNS0095593Slightly white alabastrum(diploid) 28.147
CNS0095594Slightly white alabastrum(diploid) 39.558
CNS0095595Whole white alabastrum(diploid) 212.316
CNS0095596Whole white alabastrum(diploid) 312.290
CNS0095597Whole white alabastrum(diploid) 419.867
CNS0095598Silvery flower (diploied) 11.956
CNS0095599Silvery flower (diploied) 23.605
CNS0095600Silvery flower (diploied) 33.347
CNS0095601Golden flower (diploid) 13.256
CNS0095602Golden flower (diploid) 21.920
CNS0095603Golden flower (diploid) 31.497
CNS0095604Slightly white alabastrum(tetraploid) 18.276
CNS0095605Slightly white alabastrum(tetraploid) 29.298
CNS0095606Slightly white alabastrum(tetraploid) 32.843
CNS0095607Whole white alabastrum(tetraploid) 118.576
CNS0095608Whole white alabastrum(tetraploid) 217.745
CNS0095609Whole white alabastrum(tetraploid) 37.001
CNS0095610Silvery flower (tetraploid) 12.574
CNS0095611Silvery flower (tetraploid) 24.801
CNS0095612Silvery flower (tetraploid) 317.060
CNS0095613Golden flower (tetraploid) 10.577
CNS0095614Golden flower (tetraploid) 21.000
CNS0095615Golden flower (tetraploid) 31.623
CRA001975CRR073297Stem 18.031
CRR073298Stem 26.855
CRR073299Stem 37.008
CRR073300Leaf 111.162
CRR073301Leaf 29.651
CRR073302Leaf 38.047
CRR073303Juvenile bud 17.520
CRR073304Juvenile bud 29.716
CRR073305Juvenile bud 33.715
CRR073306Third green 152.743
CRR073307Third green 219.120
CRR073308Third green 328.976
CRR073309Second white 117.763
CRR073310Second white 218.911
CRR073311Second white 310.240
CRR073312Silver flowering 13.491
CRR073313Silver flowering 24.914
CRR073314Silver flowering 32.556
CRR073315Gold flowering 13.316
CRR073316Gold flowering 22.353
CRR073317Gold flowering 31.890
CRR073318Tawny withering 17.267
CRR073319Tawny withering 22.787
CRR073320Tawny withering 34.059