Detail information of GWHGAAZE013348


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011100368.10PREDICTED: probable polyamine oxidase 2 isoform X1 [Sesamum indicum]
Swissprottr|Q9SKX5|PAO2_ARATH0Probable polyamine oxidase 2
trEMBLtr|A0A068V812|A0A068V812_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_115 {ECO:0000313|EMBL:CDP16058.1}
TAIR10AT2G43020.10polyamine oxidase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene101203596101210427-
GWHAAZE00000003mRNA101203596101210427-
GWHAAZE00000003exon101210376101210427-
GWHAAZE00000003exon101209042101209157-
GWHAAZE00000003exon101207717101207805-
GWHAAZE00000003exon101207500101207613-
GWHAAZE00000003exon101206172101206226-
GWHAAZE00000003exon101205878101205963-
GWHAAZE00000003exon101205720101205776-
GWHAAZE00000003exon101204275101204704-
GWHAAZE00000003exon101203596101203916-
GWHAAZE00000003CDS101210376101210427-
GWHAAZE00000003CDS101209042101209157-
GWHAAZE00000003CDS101207717101207805-
GWHAAZE00000003CDS101207500101207613-
GWHAAZE00000003CDS101206172101206226-
GWHAAZE00000003CDS101205878101205963-
GWHAAZE00000003CDS101205720101205776-
GWHAAZE00000003CDS101204275101204704-
GWHAAZE00000003CDS101203596101203916-
Transcript Sequence

Network for GWHGAAZE013348

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01593.25Amino_oxidase411665.50E-24
PF01593.25Amino_oxidase1914002.20E-55
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K17839PAO4, PAO3, PAO2 Metabolic pathways map01100
Arginine and proline metabolismmap00330
beta-Alanine metabolismmap00410

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf19.426
SRR3591706second leaf25.183
SRR3591707mature leaf27.961
SRR3591708Shoot apex21.859
SRR3591709Stem34.251
SRR3591710White floral bud50.750
SRR3591711White flower74.654
SRR3591712Green floral bud63.439
SRR3591713Yellow flower87.922
SRP173429 SRR8316895Juvenile bud stage 21.881
SRR8316896Juvenile bud stage 33.836
SRR8316897Juvenile bud stage 14.067
SRR8316894Third green stage 15.102
SRR8316900Third green stage 46.035
SRR8316901Third green stage 46.922
SRR8316898Complete white stage 22.829
SRR8316899Complete white stage 61.967
SRR8316903Complete white stage 27.836
SRR8316902Silver flowering stage19.257
SRR8316904Silver flowering stage17.389
SRR8316905Silver flowering stage10.123
SRR8316906Gold flowering stage 40.580
SRR8316907Gold flowering stage 51.039
SRR8316908Gold flowering stage 68.308
SRP132670SRR6706286Control58.829
SRR6706287Light intensity 50%54.564
SRR6706288Light intensity 20%53.603
CNP0000432CNS0095592Slightly white alabastrum(diploid) 129.699
CNS0095593Slightly white alabastrum(diploid) 228.132
CNS0095594Slightly white alabastrum(diploid) 329.260
CNS0095595Whole white alabastrum(diploid) 223.081
CNS0095596Whole white alabastrum(diploid) 321.316
CNS0095597Whole white alabastrum(diploid) 421.804
CNS0095598Silvery flower (diploied) 127.511
CNS0095599Silvery flower (diploied) 225.376
CNS0095600Silvery flower (diploied) 345.943
CNS0095601Golden flower (diploid) 121.661
CNS0095602Golden flower (diploid) 248.046
CNS0095603Golden flower (diploid) 346.883
CNS0095604Slightly white alabastrum(tetraploid) 128.251
CNS0095605Slightly white alabastrum(tetraploid) 227.735
CNS0095606Slightly white alabastrum(tetraploid) 337.737
CNS0095607Whole white alabastrum(tetraploid) 124.053
CNS0095608Whole white alabastrum(tetraploid) 223.369
CNS0095609Whole white alabastrum(tetraploid) 345.140
CNS0095610Silvery flower (tetraploid) 167.085
CNS0095611Silvery flower (tetraploid) 261.395
CNS0095612Silvery flower (tetraploid) 375.668
CNS0095613Golden flower (tetraploid) 150.868
CNS0095614Golden flower (tetraploid) 277.823
CNS0095615Golden flower (tetraploid) 387.804
CRA001975CRR073297Stem 144.642
CRR073298Stem 243.070
CRR073299Stem 339.268
CRR073300Leaf 145.913
CRR073301Leaf 243.650
CRR073302Leaf 340.847
CRR073303Juvenile bud 132.221
CRR073304Juvenile bud 223.883
CRR073305Juvenile bud 336.134
CRR073306Third green 120.591
CRR073307Third green 216.664
CRR073308Third green 320.158
CRR073309Second white 121.813
CRR073310Second white 222.588
CRR073311Second white 318.452
CRR073312Silver flowering 133.107
CRR073313Silver flowering 239.272
CRR073314Silver flowering 364.078
CRR073315Gold flowering 16.354
CRR073316Gold flowering 210.449
CRR073317Gold flowering 35.712
CRR073318Tawny withering 135.160
CRR073319Tawny withering 235.792
CRR073320Tawny withering 333.758