Detail information of GWHGAAZE013324


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP15340.10unnamed protein product [Coffea canephora]
Swissprottr|P22200|KPYC_SOLTU1E-121Pyruvate kinase, cytosolic isozyme
trEMBLtr|A0A068V3H1|A0A068V3H1_COFCA0Pyruvate kinase {ECO:0000256|RuleBase:RU000504}
TAIR10AT3G52990.20Pyruvate kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene100781342100794337-
GWHAAZE00000003mRNA100781342100794337-
GWHAAZE00000003exon100794269100794337-
GWHAAZE00000003exon100794059100794155-
GWHAAZE00000003exon100791035100791132-
GWHAAZE00000003exon100789908100790063-
GWHAAZE00000003exon100789197100789274-
GWHAAZE00000003exon100788618100788800-
GWHAAZE00000003exon100787995100788126-
GWHAAZE00000003exon100787117100787197-
GWHAAZE00000003exon100786928100786999-
GWHAAZE00000003exon100786712100786801-
GWHAAZE00000003exon100785152100785296-
GWHAAZE00000003exon100784514100784602-
GWHAAZE00000003exon100784247100784342-
GWHAAZE00000003exon100784027100784094-
GWHAAZE00000003exon100783794100783893-
GWHAAZE00000003exon100783282100783341-
GWHAAZE00000003exon100781342100781494-
GWHAAZE00000003CDS100794269100794337-
GWHAAZE00000003CDS100794059100794155-
GWHAAZE00000003CDS100791035100791132-
GWHAAZE00000003CDS100789908100790063-
GWHAAZE00000003CDS100789197100789274-
GWHAAZE00000003CDS100788618100788800-
GWHAAZE00000003CDS100787995100788126-
GWHAAZE00000003CDS100787117100787197-
GWHAAZE00000003CDS100786928100786999-
GWHAAZE00000003CDS100786712100786801-
GWHAAZE00000003CDS100785152100785296-
GWHAAZE00000003CDS100784514100784602-
GWHAAZE00000003CDS100784247100784342-
GWHAAZE00000003CDS100784027100784094-
GWHAAZE00000003CDS100783794100783893-
GWHAAZE00000003CDS100783282100783341-
GWHAAZE00000003CDS100781342100781494-
Transcript Sequence

Network for GWHGAAZE013324

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00224.22PK301407.70E-22
PF00224.22PK2114364.70E-65
PF02887.17PK_C4565831.00E-23
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00873PK, pyk Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pyruvate metabolismmap00620
Purine metabolismmap00230
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006096biological_processglycolytic process
GO:0000287molecular_functionmagnesium ion binding
GO:0004743molecular_functionpyruvate kinase activity
GO:0030955molecular_functionpotassium ion binding
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf99.756
SRR3591706second leaf49.389
SRR3591707mature leaf38.812
SRR3591708Shoot apex63.105
SRR3591709Stem104.261
SRR3591710White floral bud90.965
SRR3591711White flower155.394
SRR3591712Green floral bud100.398
SRR3591713Yellow flower152.952
SRP173429 SRR8316895Juvenile bud stage 56.529
SRR8316896Juvenile bud stage 106.537
SRR8316897Juvenile bud stage 51.731
SRR8316894Third green stage 46.397
SRR8316900Third green stage 138.426
SRR8316901Third green stage 129.752
SRR8316898Complete white stage 53.678
SRR8316899Complete white stage 121.428
SRR8316903Complete white stage 92.151
SRR8316902Silver flowering stage75.966
SRR8316904Silver flowering stage95.923
SRR8316905Silver flowering stage47.028
SRR8316906Gold flowering stage 136.638
SRR8316907Gold flowering stage 161.289
SRR8316908Gold flowering stage 151.583
SRP132670SRR6706286Control83.221
SRR6706287Light intensity 50%91.624
SRR6706288Light intensity 20%96.489
CNP0000432CNS0095592Slightly white alabastrum(diploid) 172.290
CNS0095593Slightly white alabastrum(diploid) 277.683
CNS0095594Slightly white alabastrum(diploid) 379.209
CNS0095595Whole white alabastrum(diploid) 263.483
CNS0095596Whole white alabastrum(diploid) 366.573
CNS0095597Whole white alabastrum(diploid) 453.806
CNS0095598Silvery flower (diploied) 149.811
CNS0095599Silvery flower (diploied) 252.735
CNS0095600Silvery flower (diploied) 394.205
CNS0095601Golden flower (diploid) 142.777
CNS0095602Golden flower (diploid) 275.833
CNS0095603Golden flower (diploid) 373.676
CNS0095604Slightly white alabastrum(tetraploid) 171.894
CNS0095605Slightly white alabastrum(tetraploid) 262.363
CNS0095606Slightly white alabastrum(tetraploid) 3104.358
CNS0095607Whole white alabastrum(tetraploid) 153.915
CNS0095608Whole white alabastrum(tetraploid) 249.401
CNS0095609Whole white alabastrum(tetraploid) 396.363
CNS0095610Silvery flower (tetraploid) 1124.471
CNS0095611Silvery flower (tetraploid) 281.957
CNS0095612Silvery flower (tetraploid) 3115.564
CNS0095613Golden flower (tetraploid) 180.431
CNS0095614Golden flower (tetraploid) 288.462
CNS0095615Golden flower (tetraploid) 365.902
CRA001975CRR073297Stem 1113.337
CRR073298Stem 2107.570
CRR073299Stem 3109.041
CRR073300Leaf 1139.314
CRR073301Leaf 2145.891
CRR073302Leaf 3130.066
CRR073303Juvenile bud 1157.005
CRR073304Juvenile bud 2142.907
CRR073305Juvenile bud 3147.122
CRR073306Third green 174.410
CRR073307Third green 277.983
CRR073308Third green 378.761
CRR073309Second white 163.356
CRR073310Second white 291.044
CRR073311Second white 392.173
CRR073312Silver flowering 1121.180
CRR073313Silver flowering 2106.265
CRR073314Silver flowering 3135.984
CRR073315Gold flowering 142.425
CRR073316Gold flowering 262.752
CRR073317Gold flowering 345.992
CRR073318Tawny withering 1122.223
CRR073319Tawny withering 2115.449
CRR073320Tawny withering 3131.822