Detail information of GWHGAAZE013320


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010654028.10PREDICTED: uncharacterized protein LOC100264768 isoform X4 [Vitis vinifera]
Swissprottr|Q9LJG8|ASIL2_ARATH2E-20Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBLtr|F6HKF7|F6HKF7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB55379.1}
TAIR10AT3G10030.25E-124aspartate/glutamate/uridylate kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene100635429100642218-
GWHAAZE00000003mRNA100635429100642218-
GWHAAZE00000003exon100635429100635636-
GWHAAZE00000003exon100636919100637004-
GWHAAZE00000003exon100637446100637499-
GWHAAZE00000003exon100637689100637836-
GWHAAZE00000003exon100640556100641010-
GWHAAZE00000003exon100641778100642218-
GWHAAZE00000003CDS100641778100642218-
GWHAAZE00000003CDS100640556100641010-
GWHAAZE00000003CDS100637689100637836-
GWHAAZE00000003CDS100637446100637499-
GWHAAZE00000003CDS100636919100637004-
GWHAAZE00000003CDS100635429100635636-
Transcript Sequence

Network for GWHGAAZE013320

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.7Myb_DNA-bind_41792695.70E-19
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.914
SRR3591706second leaf6.762
SRR3591707mature leaf5.756
SRR3591708Shoot apex8.649
SRR3591709Stem10.321
SRR3591710White floral bud14.914
SRR3591711White flower12.713
SRR3591712Green floral bud9.290
SRR3591713Yellow flower10.297
SRP173429 SRR8316895Juvenile bud stage 5.978
SRR8316896Juvenile bud stage 9.033
SRR8316897Juvenile bud stage 4.131
SRR8316894Third green stage 4.157
SRR8316900Third green stage 9.779
SRR8316901Third green stage 8.747
SRR8316898Complete white stage 5.656
SRR8316899Complete white stage 13.815
SRR8316903Complete white stage 10.783
SRR8316902Silver flowering stage3.758
SRR8316904Silver flowering stage6.000
SRR8316905Silver flowering stage4.283
SRR8316906Gold flowering stage 11.636
SRR8316907Gold flowering stage 9.871
SRR8316908Gold flowering stage 10.914
SRP132670SRR6706286Control20.436
SRR6706287Light intensity 50%18.158
SRR6706288Light intensity 20%15.586
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.348
CNS0095593Slightly white alabastrum(diploid) 23.064
CNS0095594Slightly white alabastrum(diploid) 34.796
CNS0095595Whole white alabastrum(diploid) 23.665
CNS0095596Whole white alabastrum(diploid) 33.318
CNS0095597Whole white alabastrum(diploid) 44.183
CNS0095598Silvery flower (diploied) 17.630
CNS0095599Silvery flower (diploied) 26.915
CNS0095600Silvery flower (diploied) 310.620
CNS0095601Golden flower (diploid) 18.689
CNS0095602Golden flower (diploid) 211.513
CNS0095603Golden flower (diploid) 311.846
CNS0095604Slightly white alabastrum(tetraploid) 17.394
CNS0095605Slightly white alabastrum(tetraploid) 26.241
CNS0095606Slightly white alabastrum(tetraploid) 313.928
CNS0095607Whole white alabastrum(tetraploid) 15.467
CNS0095608Whole white alabastrum(tetraploid) 23.689
CNS0095609Whole white alabastrum(tetraploid) 310.938
CNS0095610Silvery flower (tetraploid) 115.130
CNS0095611Silvery flower (tetraploid) 212.081
CNS0095612Silvery flower (tetraploid) 314.657
CNS0095613Golden flower (tetraploid) 18.713
CNS0095614Golden flower (tetraploid) 214.224
CNS0095615Golden flower (tetraploid) 39.827
CRA001975CRR073297Stem 111.222
CRR073298Stem 29.564
CRR073299Stem 38.133
CRR073300Leaf 114.818
CRR073301Leaf 212.642
CRR073302Leaf 38.950
CRR073303Juvenile bud 110.967
CRR073304Juvenile bud 28.369
CRR073305Juvenile bud 311.182
CRR073306Third green 15.914
CRR073307Third green 24.350
CRR073308Third green 35.736
CRR073309Second white 13.966
CRR073310Second white 24.620
CRR073311Second white 36.769
CRR073312Silver flowering 14.064
CRR073313Silver flowering 23.330
CRR073314Silver flowering 35.104
CRR073315Gold flowering 14.949
CRR073316Gold flowering 25.598
CRR073317Gold flowering 32.501
CRR073318Tawny withering 15.002
CRR073319Tawny withering 24.078
CRR073320Tawny withering 36.190