Detail information of GWHGAAZE013286


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010653731.10PREDICTED: monodehydroascorbate reductase isoform X1 [Vitis vinifera]
Swissprottr|Q43497|MDAR_SOLLC0Monodehydroascorbate reductase
trEMBLtr|D7TJ46|D7TJ46_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI30272.3}
TAIR10AT3G52880.10monodehydroascorbate reductase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene100089385100098008-
GWHAAZE00000003mRNA100089385100098008-
GWHAAZE00000003exon100089385100089708-
GWHAAZE00000003exon100090908100091048-
GWHAAZE00000003exon100093601100093726-
GWHAAZE00000003exon100093823100093941-
GWHAAZE00000003exon100094289100094508-
GWHAAZE00000003exon100094608100094726-
GWHAAZE00000003exon100095108100095188-
GWHAAZE00000003exon100095683100095803-
GWHAAZE00000003exon100096431100096502-
GWHAAZE00000003exon100097958100098008-
GWHAAZE00000003CDS100097958100098008-
GWHAAZE00000003CDS100096431100096502-
GWHAAZE00000003CDS100095683100095803-
GWHAAZE00000003CDS100095108100095188-
GWHAAZE00000003CDS100094608100094726-
GWHAAZE00000003CDS100094289100094508-
GWHAAZE00000003CDS100093823100093941-
GWHAAZE00000003CDS100093601100093726-
GWHAAZE00000003CDS100090908100091048-
GWHAAZE00000003CDS100089385100089708-
Transcript Sequence

Network for GWHGAAZE013286

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07992.15Pyr_redox_273454.60E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08232E1.6.5.4 Metabolic pathways map01100
Ascorbate and aldarate metabolismmap00053

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0050660molecular_functionflavin adenine dinucleotide binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf191.762
SRR3591706second leaf77.926
SRR3591707mature leaf76.140
SRR3591708Shoot apex88.020
SRR3591709Stem179.228
SRR3591710White floral bud133.304
SRR3591711White flower309.111
SRR3591712Green floral bud118.465
SRR3591713Yellow flower334.774
SRP173429 SRR8316895Juvenile bud stage 48.874
SRR8316896Juvenile bud stage 92.533
SRR8316897Juvenile bud stage 48.458
SRR8316894Third green stage 40.459
SRR8316900Third green stage 119.979
SRR8316901Third green stage 132.908
SRR8316898Complete white stage 64.112
SRR8316899Complete white stage 130.960
SRR8316903Complete white stage 100.539
SRR8316902Silver flowering stage212.683
SRR8316904Silver flowering stage251.220
SRR8316905Silver flowering stage152.680
SRR8316906Gold flowering stage 679.751
SRR8316907Gold flowering stage 603.606
SRR8316908Gold flowering stage 646.037
SRP132670SRR6706286Control97.728
SRR6706287Light intensity 50%84.168
SRR6706288Light intensity 20%81.148
CNP0000432CNS0095592Slightly white alabastrum(diploid) 191.584
CNS0095593Slightly white alabastrum(diploid) 270.582
CNS0095594Slightly white alabastrum(diploid) 369.343
CNS0095595Whole white alabastrum(diploid) 261.554
CNS0095596Whole white alabastrum(diploid) 377.355
CNS0095597Whole white alabastrum(diploid) 461.036
CNS0095598Silvery flower (diploied) 182.656
CNS0095599Silvery flower (diploied) 294.784
CNS0095600Silvery flower (diploied) 3207.721
CNS0095601Golden flower (diploid) 197.726
CNS0095602Golden flower (diploid) 2190.559
CNS0095603Golden flower (diploid) 3184.869
CNS0095604Slightly white alabastrum(tetraploid) 169.080
CNS0095605Slightly white alabastrum(tetraploid) 269.540
CNS0095606Slightly white alabastrum(tetraploid) 349.420
CNS0095607Whole white alabastrum(tetraploid) 166.129
CNS0095608Whole white alabastrum(tetraploid) 262.460
CNS0095609Whole white alabastrum(tetraploid) 391.494
CNS0095610Silvery flower (tetraploid) 1254.385
CNS0095611Silvery flower (tetraploid) 2173.532
CNS0095612Silvery flower (tetraploid) 3144.386
CNS0095613Golden flower (tetraploid) 1167.190
CNS0095614Golden flower (tetraploid) 2221.063
CNS0095615Golden flower (tetraploid) 3206.743
CRA001975CRR073297Stem 148.771
CRR073298Stem 245.933
CRR073299Stem 344.395
CRR073300Leaf 153.055
CRR073301Leaf 264.474
CRR073302Leaf 349.461
CRR073303Juvenile bud 162.385
CRR073304Juvenile bud 245.508
CRR073305Juvenile bud 352.523
CRR073306Third green 198.237
CRR073307Third green 291.241
CRR073308Third green 396.553
CRR073309Second white 1221.853
CRR073310Second white 2262.137
CRR073311Second white 3287.200
CRR073312Silver flowering 1285.299
CRR073313Silver flowering 2190.689
CRR073314Silver flowering 3253.004
CRR073315Gold flowering 114.575
CRR073316Gold flowering 219.404
CRR073317Gold flowering 316.328
CRR073318Tawny withering 1101.935
CRR073319Tawny withering 2116.151
CRR073320Tawny withering 391.283