Detail information of GWHGAAZE013203


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010241817.12.36938E-20PREDICTED: transcription factor-like protein DPB [Nelumbo nucifera]
Swissprottr|Q9FNY2|DPB_ARATH0.000000004Transcription factor-like protein DPB
trEMBLtr|A0A022PSX3|A0A022PSX3_ERYGU1E-16Uncharacterized protein {ECO:0000313|EMBL:EYU18629.1}
TAIR10AT5G03415.10.0000004Transcription factor DP

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9860533898605586+
GWHAAZE00000003mRNA9860533898605586+
GWHAAZE00000003exon9860533898605586+
GWHAAZE00000003CDS9860533898605586+
Transcript Sequence

Network for GWHGAAZE013203

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04683TFDP1 TGF-beta signaling pathway map04350
Cell cyclemap04110

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.655
SRR3591706second leaf1.302
SRR3591707mature leaf0.826
SRR3591708Shoot apex4.262
SRR3591709Stem2.332
SRR3591710White floral bud1.912
SRR3591711White flower1.515
SRR3591712Green floral bud1.829
SRR3591713Yellow flower0.796
SRP173429 SRR8316895Juvenile bud stage 2.107
SRR8316896Juvenile bud stage 2.425
SRR8316897Juvenile bud stage 0.495
SRR8316894Third green stage 1.488
SRR8316900Third green stage 3.709
SRR8316901Third green stage 1.946
SRR8316898Complete white stage 1.007
SRR8316899Complete white stage 1.812
SRR8316903Complete white stage 0.861
SRR8316902Silver flowering stage1.385
SRR8316904Silver flowering stage1.740
SRR8316905Silver flowering stage0.409
SRR8316906Gold flowering stage 1.415
SRR8316907Gold flowering stage 2.656
SRR8316908Gold flowering stage 2.339
SRP132670SRR6706286Control6.675
SRR6706287Light intensity 50%4.547
SRR6706288Light intensity 20%4.882
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.014
CNS0095593Slightly white alabastrum(diploid) 21.138
CNS0095594Slightly white alabastrum(diploid) 31.802
CNS0095595Whole white alabastrum(diploid) 21.386
CNS0095596Whole white alabastrum(diploid) 30.875
CNS0095597Whole white alabastrum(diploid) 41.264
CNS0095598Silvery flower (diploied) 12.611
CNS0095599Silvery flower (diploied) 23.896
CNS0095600Silvery flower (diploied) 32.362
CNS0095601Golden flower (diploid) 12.296
CNS0095602Golden flower (diploid) 23.236
CNS0095603Golden flower (diploid) 32.989
CNS0095604Slightly white alabastrum(tetraploid) 13.389
CNS0095605Slightly white alabastrum(tetraploid) 23.352
CNS0095606Slightly white alabastrum(tetraploid) 34.102
CNS0095607Whole white alabastrum(tetraploid) 12.333
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 32.504
CNS0095610Silvery flower (tetraploid) 11.596
CNS0095611Silvery flower (tetraploid) 23.132
CNS0095612Silvery flower (tetraploid) 33.646
CNS0095613Golden flower (tetraploid) 10.386
CNS0095614Golden flower (tetraploid) 21.053
CNS0095615Golden flower (tetraploid) 31.437
CRA001975CRR073297Stem 18.254
CRR073298Stem 25.903
CRR073299Stem 35.485
CRR073300Leaf 16.922
CRR073301Leaf 24.808
CRR073302Leaf 35.655
CRR073303Juvenile bud 13.214
CRR073304Juvenile bud 23.163
CRR073305Juvenile bud 33.497
CRR073306Third green 12.143
CRR073307Third green 20.827
CRR073308Third green 32.460
CRR073309Second white 12.300
CRR073310Second white 22.440
CRR073311Second white 32.093
CRR073312Silver flowering 12.056
CRR073313Silver flowering 23.219
CRR073314Silver flowering 32.704
CRR073315Gold flowering 12.599
CRR073316Gold flowering 25.221
CRR073317Gold flowering 34.294
CRR073318Tawny withering 110.855
CRR073319Tawny withering 24.652
CRR073320Tawny withering 37.865