Detail information of GWHGAAZE013102


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002270472.15.25E-166PREDICTED: uncharacterized protein LOC100256181 [Vitis vinifera]
Swissprottr|Q9S7G7|MB3R1_ARATH2E-41Myb-related protein 3R-1
trEMBLtr|F6HLC5|F6HLC5_VITVI2E-166Putative uncharacterized protein {ECO:0000313|EMBL:CCB55589.1}
TAIR10AT5G02320.26E-74myb domain protein 3r-5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9678105896787791-
GWHAAZE00000003mRNA9678105896787791-
GWHAAZE00000003exon9678105896782057-
GWHAAZE00000003exon9678355696783659-
GWHAAZE00000003exon9678378096783874-
GWHAAZE00000003exon9678536596785422-
GWHAAZE00000003exon9678649796786581-
GWHAAZE00000003exon9678764696787791-
GWHAAZE00000003CDS9678764696787791-
GWHAAZE00000003CDS9678649796786581-
GWHAAZE00000003CDS9678536596785422-
GWHAAZE00000003CDS9678378096783874-
GWHAAZE00000003CDS9678355696783659-
GWHAAZE00000003CDS9678105896782057-
Transcript Sequence

Network for GWHGAAZE013102

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.32Myb_DNA-binding781163.60E-08
PF00249.32Myb_DNA-binding1221631.70E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf19.606
SRR3591706second leaf14.090
SRR3591707mature leaf16.684
SRR3591708Shoot apex18.184
SRR3591709Stem21.294
SRR3591710White floral bud28.198
SRR3591711White flower29.339
SRR3591712Green floral bud22.691
SRR3591713Yellow flower32.201
SRP173429 SRR8316895Juvenile bud stage 12.479
SRR8316896Juvenile bud stage 14.863
SRR8316897Juvenile bud stage 7.471
SRR8316894Third green stage 5.935
SRR8316900Third green stage 15.277
SRR8316901Third green stage 17.798
SRR8316898Complete white stage 10.301
SRR8316899Complete white stage 36.560
SRR8316903Complete white stage 17.362
SRR8316902Silver flowering stage11.912
SRR8316904Silver flowering stage16.918
SRR8316905Silver flowering stage8.363
SRR8316906Gold flowering stage 29.669
SRR8316907Gold flowering stage 25.651
SRR8316908Gold flowering stage 26.689
SRP132670SRR6706286Control12.347
SRR6706287Light intensity 50%12.533
SRR6706288Light intensity 20%15.601
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.402
CNS0095593Slightly white alabastrum(diploid) 211.162
CNS0095594Slightly white alabastrum(diploid) 39.937
CNS0095595Whole white alabastrum(diploid) 210.109
CNS0095596Whole white alabastrum(diploid) 37.662
CNS0095597Whole white alabastrum(diploid) 49.611
CNS0095598Silvery flower (diploied) 116.988
CNS0095599Silvery flower (diploied) 213.380
CNS0095600Silvery flower (diploied) 326.744
CNS0095601Golden flower (diploid) 115.868
CNS0095602Golden flower (diploid) 229.948
CNS0095603Golden flower (diploid) 327.819
CNS0095604Slightly white alabastrum(tetraploid) 110.588
CNS0095605Slightly white alabastrum(tetraploid) 28.276
CNS0095606Slightly white alabastrum(tetraploid) 319.794
CNS0095607Whole white alabastrum(tetraploid) 16.504
CNS0095608Whole white alabastrum(tetraploid) 24.725
CNS0095609Whole white alabastrum(tetraploid) 313.646
CNS0095610Silvery flower (tetraploid) 124.647
CNS0095611Silvery flower (tetraploid) 224.086
CNS0095612Silvery flower (tetraploid) 322.851
CNS0095613Golden flower (tetraploid) 118.684
CNS0095614Golden flower (tetraploid) 222.679
CNS0095615Golden flower (tetraploid) 327.191
CRA001975CRR073297Stem 114.548
CRR073298Stem 211.068
CRR073299Stem 38.858
CRR073300Leaf 115.460
CRR073301Leaf 212.260
CRR073302Leaf 310.103
CRR073303Juvenile bud 111.333
CRR073304Juvenile bud 212.474
CRR073305Juvenile bud 313.038
CRR073306Third green 16.513
CRR073307Third green 27.201
CRR073308Third green 37.239
CRR073309Second white 19.435
CRR073310Second white 210.757
CRR073311Second white 38.950
CRR073312Silver flowering 16.052
CRR073313Silver flowering 25.295
CRR073314Silver flowering 38.564
CRR073315Gold flowering 18.161
CRR073316Gold flowering 210.705
CRR073317Gold flowering 39.327
CRR073318Tawny withering 18.611
CRR073319Tawny withering 211.928
CRR073320Tawny withering 38.705