Detail information of GWHGAAZE012949


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007033531.10High-level expression of sugar-inducible gene 2, putative isoform 2 [Theobroma cacao]
Swissprottr|Q6Z3U3|Y7797_ORYSJ0B3 domain-containing protein Os07g0679700
trEMBLtr|A0A061EJ57|A0A061EJ57_THECC0High-level expression of sugar-inducible gene 2, putative isoform 2 {ECO:0000313|EMBL:EOY04457.1}
TAIR10AT4G32010.19E-147HSI2-like 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9413650694151496+
GWHAAZE00000003mRNA9413650694151496+
GWHAAZE00000003exon9413650694136655+
GWHAAZE00000003exon9413680294136976+
GWHAAZE00000003exon9413754194137617+
GWHAAZE00000003exon9413777394138186+
GWHAAZE00000003exon9413933994139388+
GWHAAZE00000003exon9414053794140650+
GWHAAZE00000003exon9414073794140804+
GWHAAZE00000003exon9415074294151496+
GWHAAZE00000003CDS9413650694136655+
GWHAAZE00000003CDS9413680294136976+
GWHAAZE00000003CDS9413754194137617+
GWHAAZE00000003CDS9413777394138186+
GWHAAZE00000003CDS9413933994139388+
GWHAAZE00000003CDS9414053794140650+
GWHAAZE00000003CDS9414073794140804+
GWHAAZE00000003CDS9415074294151496+
Transcript Sequence

Network for GWHGAAZE012949

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.22B3271273.20E-16
PF07496.16zf-CW2933352.80E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.947
SRR3591706second leaf5.608
SRR3591707mature leaf6.013
SRR3591708Shoot apex9.923
SRR3591709Stem42.271
SRR3591710White floral bud17.405
SRR3591711White flower31.261
SRR3591712Green floral bud7.670
SRR3591713Yellow flower34.290
SRP173429 SRR8316895Juvenile bud stage 10.536
SRR8316896Juvenile bud stage 13.420
SRR8316897Juvenile bud stage 3.881
SRR8316894Third green stage 4.966
SRR8316900Third green stage 7.852
SRR8316901Third green stage 9.475
SRR8316898Complete white stage 7.417
SRR8316899Complete white stage 9.885
SRR8316903Complete white stage 12.599
SRR8316902Silver flowering stage11.347
SRR8316904Silver flowering stage18.426
SRR8316905Silver flowering stage6.414
SRR8316906Gold flowering stage 29.360
SRR8316907Gold flowering stage 36.137
SRR8316908Gold flowering stage 29.332
SRP132670SRR6706286Control12.206
SRR6706287Light intensity 50%11.536
SRR6706288Light intensity 20%9.580
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.639
CNS0095593Slightly white alabastrum(diploid) 25.462
CNS0095594Slightly white alabastrum(diploid) 36.810
CNS0095595Whole white alabastrum(diploid) 23.990
CNS0095596Whole white alabastrum(diploid) 33.226
CNS0095597Whole white alabastrum(diploid) 45.016
CNS0095598Silvery flower (diploied) 112.304
CNS0095599Silvery flower (diploied) 25.868
CNS0095600Silvery flower (diploied) 323.594
CNS0095601Golden flower (diploid) 18.654
CNS0095602Golden flower (diploid) 224.728
CNS0095603Golden flower (diploid) 325.373
CNS0095604Slightly white alabastrum(tetraploid) 17.186
CNS0095605Slightly white alabastrum(tetraploid) 25.749
CNS0095606Slightly white alabastrum(tetraploid) 316.317
CNS0095607Whole white alabastrum(tetraploid) 13.772
CNS0095608Whole white alabastrum(tetraploid) 22.849
CNS0095609Whole white alabastrum(tetraploid) 38.594
CNS0095610Silvery flower (tetraploid) 123.142
CNS0095611Silvery flower (tetraploid) 220.874
CNS0095612Silvery flower (tetraploid) 330.392
CNS0095613Golden flower (tetraploid) 120.580
CNS0095614Golden flower (tetraploid) 227.170
CNS0095615Golden flower (tetraploid) 342.907
CRA001975CRR073297Stem 120.446
CRR073298Stem 215.639
CRR073299Stem 314.440
CRR073300Leaf 110.313
CRR073301Leaf 210.224
CRR073302Leaf 38.232
CRR073303Juvenile bud 16.062
CRR073304Juvenile bud 26.696
CRR073305Juvenile bud 310.512
CRR073306Third green 111.692
CRR073307Third green 29.862
CRR073308Third green 314.208
CRR073309Second white 119.078
CRR073310Second white 222.232
CRR073311Second white 325.184
CRR073312Silver flowering 125.510
CRR073313Silver flowering 222.118
CRR073314Silver flowering 321.081
CRR073315Gold flowering 113.055
CRR073316Gold flowering 219.154
CRR073317Gold flowering 314.886
CRR073318Tawny withering 121.426
CRR073319Tawny withering 216.555
CRR073320Tawny withering 323.815