Detail information of GWHGAAZE012896


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO55318.10hypothetical protein CISIN_1g006594mg [Citrus sinensis]
Swissprottr|Q0WQF7|ODP21_ARATH0Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial (Precursor)
trEMBLtr|A0A067EJR5|A0A067EJR5_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO55318.1}
TAIR10AT3G52200.11E-164Dihydrolipoamide acetyltransferase, long form protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9339347293411904-
GWHAAZE00000003mRNA9339347293411904-
GWHAAZE00000003exon9341182893411904-
GWHAAZE00000003exon9341148993411543-
GWHAAZE00000003exon9341138293411415-
GWHAAZE00000003exon9340591193405960-
GWHAAZE00000003exon9340575993405803-
GWHAAZE00000003exon9340551793405590-
GWHAAZE00000003exon9340533593405404-
GWHAAZE00000003exon9340097993401170-
GWHAAZE00000003exon9340041093400483-
GWHAAZE00000003exon9340023493400303-
GWHAAZE00000003exon9339929793399680-
GWHAAZE00000003exon9339807493398134-
GWHAAZE00000003exon9339794593397989-
GWHAAZE00000003exon9339778693397869-
GWHAAZE00000003exon9339595293396046-
GWHAAZE00000003exon9339513993395254-
GWHAAZE00000003exon9339502293395046-
GWHAAZE00000003exon9339418593394245-
GWHAAZE00000003exon9339401193394095-
GWHAAZE00000003exon9339347293393595-
GWHAAZE00000003CDS9341182893411904-
GWHAAZE00000003CDS9341148993411543-
GWHAAZE00000003CDS9341138293411415-
GWHAAZE00000003CDS9340591193405960-
GWHAAZE00000003CDS9340575993405803-
GWHAAZE00000003CDS9340551793405590-
GWHAAZE00000003CDS9340533593405404-
GWHAAZE00000003CDS9340097993401170-
GWHAAZE00000003CDS9340041093400483-
GWHAAZE00000003CDS9340023493400303-
GWHAAZE00000003CDS9339929793399680-
GWHAAZE00000003CDS9339807493398134-
GWHAAZE00000003CDS9339794593397989-
GWHAAZE00000003CDS9339778693397869-
GWHAAZE00000003CDS9339595293396046-
GWHAAZE00000003CDS9339513993395254-
GWHAAZE00000003CDS9339502293395046-
GWHAAZE00000003CDS9339418593394245-
GWHAAZE00000003CDS9339401193394095-
GWHAAZE00000003CDS9339347293393595-
Transcript Sequence

Network for GWHGAAZE012896

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00364.23Biotin_lipoyl631344.30E-19
PF00364.23Biotin_lipoyl2002461.40E-09
PF02817.18E3_binding2893244.90E-10
PF00198.242-oxoacid_dh3644763.40E-21
PF00198.242-oxoacid_dh4805643.50E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00627DLAT, aceF, pdhC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cyclemap00020
Pyruvate metabolismmap00620

Gene Ontology

GO term OntologyName
GO:0016746molecular_functiontransferase activity, transferring acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf54.268
SRR3591706second leaf26.897
SRR3591707mature leaf17.610
SRR3591708Shoot apex39.697
SRR3591709Stem41.518
SRR3591710White floral bud51.183
SRR3591711White flower72.314
SRR3591712Green floral bud68.989
SRR3591713Yellow flower72.384
SRP173429 SRR8316895Juvenile bud stage 29.998
SRR8316896Juvenile bud stage 48.591
SRR8316897Juvenile bud stage 24.319
SRR8316894Third green stage 22.107
SRR8316900Third green stage 71.792
SRR8316901Third green stage 64.436
SRR8316898Complete white stage 34.277
SRR8316899Complete white stage 69.719
SRR8316903Complete white stage 49.278
SRR8316902Silver flowering stage36.160
SRR8316904Silver flowering stage55.234
SRR8316905Silver flowering stage27.964
SRR8316906Gold flowering stage 82.143
SRR8316907Gold flowering stage 80.599
SRR8316908Gold flowering stage 102.074
SRP132670SRR6706286Control40.907
SRR6706287Light intensity 50%42.822
SRR6706288Light intensity 20%44.117
CNP0000432CNS0095592Slightly white alabastrum(diploid) 131.217
CNS0095593Slightly white alabastrum(diploid) 228.688
CNS0095594Slightly white alabastrum(diploid) 329.323
CNS0095595Whole white alabastrum(diploid) 232.521
CNS0095596Whole white alabastrum(diploid) 341.080
CNS0095597Whole white alabastrum(diploid) 435.864
CNS0095598Silvery flower (diploied) 125.279
CNS0095599Silvery flower (diploied) 222.416
CNS0095600Silvery flower (diploied) 363.685
CNS0095601Golden flower (diploid) 120.690
CNS0095602Golden flower (diploid) 256.065
CNS0095603Golden flower (diploid) 354.377
CNS0095604Slightly white alabastrum(tetraploid) 152.490
CNS0095605Slightly white alabastrum(tetraploid) 247.939
CNS0095606Slightly white alabastrum(tetraploid) 353.426
CNS0095607Whole white alabastrum(tetraploid) 145.373
CNS0095608Whole white alabastrum(tetraploid) 247.175
CNS0095609Whole white alabastrum(tetraploid) 371.074
CNS0095610Silvery flower (tetraploid) 173.744
CNS0095611Silvery flower (tetraploid) 275.238
CNS0095612Silvery flower (tetraploid) 365.933
CNS0095613Golden flower (tetraploid) 141.983
CNS0095614Golden flower (tetraploid) 271.249
CNS0095615Golden flower (tetraploid) 372.068
CRA001975CRR073297Stem 139.311
CRR073298Stem 236.050
CRR073299Stem 329.432
CRR073300Leaf 145.579
CRR073301Leaf 237.076
CRR073302Leaf 336.018
CRR073303Juvenile bud 137.096
CRR073304Juvenile bud 230.878
CRR073305Juvenile bud 334.024
CRR073306Third green 122.260
CRR073307Third green 223.256
CRR073308Third green 323.599
CRR073309Second white 133.763
CRR073310Second white 238.757
CRR073311Second white 336.822
CRR073312Silver flowering 130.505
CRR073313Silver flowering 230.061
CRR073314Silver flowering 327.705
CRR073315Gold flowering 19.021
CRR073316Gold flowering 210.445
CRR073317Gold flowering 34.828
CRR073318Tawny withering 131.082
CRR073319Tawny withering 226.230
CRR073320Tawny withering 332.862