Detail information of GWHGAAZE012881


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002311966.25.48237E-93hypothetical protein POPTR_0008s02580g [Populus trichocarpa]
Swissprottr|Q9LZS0|PTL_ARATH2E-67Trihelix transcription factor PTL
trEMBLtr|B9HL34|B9HL34_POPTR2E-93Uncharacterized protein {ECO:0000313|EMBL:EEE89333.2}
TAIR10AT5G03680.12E-59Duplicated homeodomain-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9314271493145316-
GWHAAZE00000003mRNA9314271493145316-
GWHAAZE00000003exon9314503093145316-
GWHAAZE00000003exon9314271493143614-
GWHAAZE00000003CDS9314503093145316-
GWHAAZE00000003CDS9314271493143614-
Transcript Sequence

Network for GWHGAAZE012881

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.7Myb_DNA-bind_4661473.50E-10
PF13837.7Myb_DNA-bind_43253861.10E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.090
SRR3591706second leaf0.064
SRR3591707mature leaf0.091
SRR3591708Shoot apex0.093
SRR3591709Stem0.104
SRR3591710White floral bud2.881
SRR3591711White flower2.176
SRR3591712Green floral bud1.726
SRR3591713Yellow flower0.958
SRP173429 SRR8316895Juvenile bud stage 0.336
SRR8316896Juvenile bud stage 1.297
SRR8316897Juvenile bud stage 0.460
SRR8316894Third green stage 0.854
SRR8316900Third green stage 2.023
SRR8316901Third green stage 1.331
SRR8316898Complete white stage 1.209
SRR8316899Complete white stage 3.025
SRR8316903Complete white stage 2.455
SRR8316902Silver flowering stage0.353
SRR8316904Silver flowering stage0.974
SRR8316905Silver flowering stage0.200
SRR8316906Gold flowering stage 0.403
SRR8316907Gold flowering stage 0.052
SRR8316908Gold flowering stage 0.493
SRP132670SRR6706286Control0.489
SRR6706287Light intensity 50%0.511
SRR6706288Light intensity 20%0.606
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.486
CNS0095593Slightly white alabastrum(diploid) 20.292
CNS0095594Slightly white alabastrum(diploid) 30.271
CNS0095595Whole white alabastrum(diploid) 20.177
CNS0095596Whole white alabastrum(diploid) 30.405
CNS0095597Whole white alabastrum(diploid) 40.351
CNS0095598Silvery flower (diploied) 10.123
CNS0095599Silvery flower (diploied) 20.101
CNS0095600Silvery flower (diploied) 32.370
CNS0095601Golden flower (diploid) 10.131
CNS0095602Golden flower (diploid) 21.016
CNS0095603Golden flower (diploid) 30.371
CNS0095604Slightly white alabastrum(tetraploid) 11.900
CNS0095605Slightly white alabastrum(tetraploid) 20.445
CNS0095606Slightly white alabastrum(tetraploid) 33.544
CNS0095607Whole white alabastrum(tetraploid) 10.677
CNS0095608Whole white alabastrum(tetraploid) 20.533
CNS0095609Whole white alabastrum(tetraploid) 31.275
CNS0095610Silvery flower (tetraploid) 10.619
CNS0095611Silvery flower (tetraploid) 21.293
CNS0095612Silvery flower (tetraploid) 30.867
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.420
CNS0095615Golden flower (tetraploid) 30.121
CRA001975CRR073297Stem 10.973
CRR073298Stem 20.980
CRR073299Stem 30.757
CRR073300Leaf 11.682
CRR073301Leaf 21.327
CRR073302Leaf 30.798
CRR073303Juvenile bud 10.792
CRR073304Juvenile bud 20.907
CRR073305Juvenile bud 31.688
CRR073306Third green 10.063
CRR073307Third green 20.110
CRR073308Third green 30.000
CRR073309Second white 10.066
CRR073310Second white 20.148
CRR073311Second white 30.337
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.043
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.002
CRR073320Tawny withering 30.042