Detail information of GWHGAAZE012783


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002513613.10pyruvate kinase, putative [Ricinus communis]
Swissprottr|Q9FLW9|PKP2_ARATH0Plastidial pyruvate kinase 2 (Precursor)
trEMBLtr|B9RIP4|B9RIP4_RICCO0Pyruvate kinase {ECO:0000256|RuleBase:RU000504}
TAIR10AT5G52920.10plastidic pyruvate kinase beta subunit 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9148023091487684-
GWHAAZE00000003mRNA9148023091487684-
GWHAAZE00000003exon9148744891487684-
GWHAAZE00000003exon9148628491486625-
GWHAAZE00000003exon9148500091485165-
GWHAAZE00000003exon9148432491484458-
GWHAAZE00000003exon9148409091484200-
GWHAAZE00000003exon9148387591483963-
GWHAAZE00000003exon9148364091483702-
GWHAAZE00000003exon9148297291483147-
GWHAAZE00000003exon9148238191482483-
GWHAAZE00000003exon9148208191482229-
GWHAAZE00000003exon9148142991481537-
GWHAAZE00000003exon9148023091480337-
GWHAAZE00000003CDS9148744891487684-
GWHAAZE00000003CDS9148628491486625-
GWHAAZE00000003CDS9148500091485165-
GWHAAZE00000003CDS9148432491484458-
GWHAAZE00000003CDS9148409091484200-
GWHAAZE00000003CDS9148387591483963-
GWHAAZE00000003CDS9148364091483702-
GWHAAZE00000003CDS9148297291483147-
GWHAAZE00000003CDS9148238191482483-
GWHAAZE00000003CDS9148208191482229-
GWHAAZE00000003CDS9148142991481537-
GWHAAZE00000003CDS9148023091480337-
Transcript Sequence

Network for GWHGAAZE012783

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00224.22PK1021704.30E-22
PF00224.22PK1924603.10E-87
PF02887.17PK_C4875751.10E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00873PK, pyk Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pyruvate metabolismmap00620
Purine metabolismmap00230
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006096biological_processglycolytic process
GO:0000287molecular_functionmagnesium ion binding
GO:0004743molecular_functionpyruvate kinase activity
GO:0030955molecular_functionpotassium ion binding
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf52.780
SRR3591706second leaf58.254
SRR3591707mature leaf25.472
SRR3591708Shoot apex66.447
SRR3591709Stem26.800
SRR3591710White floral bud22.210
SRR3591711White flower32.133
SRR3591712Green floral bud35.720
SRR3591713Yellow flower27.691
SRP173429 SRR8316895Juvenile bud stage 33.707
SRR8316896Juvenile bud stage 44.545
SRR8316897Juvenile bud stage 21.316
SRR8316894Third green stage 15.404
SRR8316900Third green stage 36.104
SRR8316901Third green stage 30.291
SRR8316898Complete white stage 6.031
SRR8316899Complete white stage 28.512
SRR8316903Complete white stage 8.178
SRR8316902Silver flowering stage3.675
SRR8316904Silver flowering stage4.071
SRR8316905Silver flowering stage2.059
SRR8316906Gold flowering stage 7.054
SRR8316907Gold flowering stage 8.112
SRR8316908Gold flowering stage 12.682
SRP132670SRR6706286Control38.372
SRR6706287Light intensity 50%38.771
SRR6706288Light intensity 20%42.115
CNP0000432CNS0095592Slightly white alabastrum(diploid) 129.863
CNS0095593Slightly white alabastrum(diploid) 228.033
CNS0095594Slightly white alabastrum(diploid) 329.295
CNS0095595Whole white alabastrum(diploid) 222.749
CNS0095596Whole white alabastrum(diploid) 322.622
CNS0095597Whole white alabastrum(diploid) 419.678
CNS0095598Silvery flower (diploied) 120.400
CNS0095599Silvery flower (diploied) 224.496
CNS0095600Silvery flower (diploied) 318.044
CNS0095601Golden flower (diploid) 119.298
CNS0095602Golden flower (diploid) 220.098
CNS0095603Golden flower (diploid) 319.447
CNS0095604Slightly white alabastrum(tetraploid) 131.949
CNS0095605Slightly white alabastrum(tetraploid) 229.710
CNS0095606Slightly white alabastrum(tetraploid) 346.378
CNS0095607Whole white alabastrum(tetraploid) 114.273
CNS0095608Whole white alabastrum(tetraploid) 211.857
CNS0095609Whole white alabastrum(tetraploid) 331.593
CNS0095610Silvery flower (tetraploid) 122.000
CNS0095611Silvery flower (tetraploid) 221.019
CNS0095612Silvery flower (tetraploid) 318.899
CNS0095613Golden flower (tetraploid) 19.592
CNS0095614Golden flower (tetraploid) 216.890
CNS0095615Golden flower (tetraploid) 35.008
CRA001975CRR073297Stem 163.382
CRR073298Stem 257.074
CRR073299Stem 361.859
CRR073300Leaf 146.204
CRR073301Leaf 246.219
CRR073302Leaf 351.947
CRR073303Juvenile bud 154.251
CRR073304Juvenile bud 231.938
CRR073305Juvenile bud 343.540
CRR073306Third green 18.271
CRR073307Third green 27.872
CRR073308Third green 38.733
CRR073309Second white 18.027
CRR073310Second white 26.130
CRR073311Second white 35.090
CRR073312Silver flowering 14.422
CRR073313Silver flowering 26.291
CRR073314Silver flowering 33.040
CRR073315Gold flowering 141.227
CRR073316Gold flowering 254.734
CRR073317Gold flowering 339.539
CRR073318Tawny withering 157.016
CRR073319Tawny withering 239.127
CRR073320Tawny withering 375.755