Gene detail

Detail information of GWHGAAZE012736

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_009590032.1	PREDICTED: uncharacterized protein LOC104087315 isoform X2 [Nicotiana tomentosiformis]
trEMBL	tr\|B9SLQ7\|B9SLQ7_RICCO	Putative uncharacterized protein {ECO:0000313\|EMBL:EEF35413.1}
TAIR10	AT3G27325.2	hydrolases, acting on ester bonds

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	90646833	90669070	+
GWHAAZE00000003	mRNA	90646833	90669070	+
GWHAAZE00000003	exon	90646833	90647126	+
GWHAAZE00000003	exon	90647866	90648111	+
GWHAAZE00000003	exon	90650916	90651106	+
GWHAAZE00000003	exon	90651474	90651645	+
GWHAAZE00000003	exon	90654957	90655094	+
GWHAAZE00000003	exon	90655345	90655528	+
GWHAAZE00000003	exon	90656896	90657041	+
GWHAAZE00000003	exon	90657578	90657754	+
GWHAAZE00000003	exon	90658184	90658294	+
GWHAAZE00000003	exon	90659649	90659768	+
GWHAAZE00000003	exon	90660178	90660334	+
GWHAAZE00000003	exon	90663100	90663263	+
GWHAAZE00000003	exon	90663660	90663746	+
GWHAAZE00000003	exon	90665015	90665239	+
GWHAAZE00000003	exon	90665959	90666037	+
GWHAAZE00000003	exon	90666369	90666429	+
GWHAAZE00000003	exon	90667128	90667389	+
GWHAAZE00000003	exon	90668738	90669070	+
GWHAAZE00000003	CDS	90646833	90647126	+
GWHAAZE00000003	CDS	90647866	90648111	+
GWHAAZE00000003	CDS	90650916	90651106	+
GWHAAZE00000003	CDS	90651474	90651645	+
GWHAAZE00000003	CDS	90654957	90655094	+
GWHAAZE00000003	CDS	90655345	90655528	+
GWHAAZE00000003	CDS	90656896	90657041	+
GWHAAZE00000003	CDS	90657578	90657754	+
GWHAAZE00000003	CDS	90658184	90658294	+
GWHAAZE00000003	CDS	90659649	90659768	+
GWHAAZE00000003	CDS	90660178	90660334	+
GWHAAZE00000003	CDS	90663100	90663263	+
GWHAAZE00000003	CDS	90663660	90663746	+
GWHAAZE00000003	CDS	90665015	90665239	+
GWHAAZE00000003	CDS	90665959	90666037	+
GWHAAZE00000003	CDS	90666369	90666429	+
GWHAAZE00000003	CDS	90667128	90667389	+
GWHAAZE00000003	CDS	90668738	90669070	+

Transcript Sequence
>GWHTAAZE012750 ATGATGCAAAGTTTCAAATCCAAAATTAGAGTGGCGGCTCTCGTTGTTACTTGCATTGGGATCGCTCTTGCTGCTGCATACAGTATGCTAAAGCCAATTTCAAATGGTTGTAATATGACATACATGTATCCTACATACATACCGATCTCCTCGGGGGCAAATTTGTCAACTGCAAAGTACGGATTGTATTTGTACCATGAAGGATGGAGAAAGATTGACTTTAACGAGCACCTTAAGAAGCTTAGTGGTATTCCTATGCTTTTTATTCCTGGAAATGGTGGTAGCTACAAGCAGGTTAGGTCCTTGGCAGCGGAATCTGATAGGGCTTATCAAGGTGGCCCACTTGAGCGGATGTTTTACCAAGAAGCTTCCTTAACTGTTGAGGAGGGAGTAAATATGGATTTTGCTGACCTTCCAATACCCAATCAGTATACTTGCATGCTTGATTGGTTTGCGGTGGATCTTGAAGGTGAACATTCTGCAATGGATGGTCGGATACTTGAAGAACACACAGAATATGTAGTATATGCCATTAACAGGATCCTGGATCTATATAAAGAGTCCCATGAAACTCGAGTAAGAGAAGGTGCTGCCGGCTCGGGAAATCTGCCTAAAAGTGTTATATTAGTTGGTCACTCGATGGGTGGTTTTGTTGCTAGAGCTGCAATTGTCCACCCACATTTAAGAAAATCCACTGTTGAAACTGTTCTTACGCTTTCTGCCCCACACCAGTCACCTCCTGTGGCATTGCAGCCGTCCTTGGGTCACTATTATGCACATGTGAATAAGGAATGGAGAAAGGGATATGAGGTCCAAACCTCTCGAACAGGCCGTTATATGTCTAGTCCTCTACTCTCCAATGTTGTTGTTGTTTCCATTTCTGGTGGCATTAATGATTACCAGGTACGGGCAAAGTTGGAATCGCTTGATGGTATAGTGCCACCTACACATGGGTTTATGATTAGTAGTTCAGGCATGAAGAATGTGTGGTTGTCAATGGAGCATCAGGTTATCTTGTGGTGCAATCAACTAGTTGTGCAAGTTTCGCACACTCTTCTTAGTCTGACAGACCCTGAAACTGGCCGCCCTTATTCTGAGGGAAGAAAAAGACTTGCAATTTTTGCAAAGATGCTACGTAGTGGAATGCCAGAGAATTGGTTAAAGCTATCACATCTATCTCGCCAGTTGCCACAAGTTCCTTCTCGGATTAGAAATATGAATGCTGGATCTCAAGTGAACACAATATCTGCTTGTCCCAGTAGTGTTCATTGGAGTGATGATGGACTTGAAAGAGATCTATACATTGAGACGGCTACTGTCACTGTTTTAGCAATGGATGGGAGGAGACGGTGGTTGGACATTAAGAAACTGGGTTCAAATGGAAAAAACCACTTCATTTTTGTCACGAATCTTATTCCATGTTATGGGGTTAGACTTCATCTTTGGCCAGAAAAAGGACTTTCGGATTCAGATATGTCTGCTAGTAAGAAGGTTCTAGAAGTGACATTGAAGATGGTGCAGATCCCATCTGGACCAGCGCCAAGGCAGATTGAACCAGGTAGCCAGACTGAACAAGCATCTCCATCTGCTGTATTTTGGTTGGATTCTGAGGACATGCGTGGTTACAGATTCCTGACAATCTCAGTTGCTCCTAGTCCGGCTATTTCCGGGAGACCTCCACCAGCAGCTTCCATGGCAGTTGGACAGTTCTTCAATCCTGATGAAGGGAAGAGAGAGTTGTCTCCTCATTCCTTGCTCCTCTCGATGTATTCTCAAATGGATATGATACTGAAGGAGGATCATCCACTTGCATTAAATATGCTATTCACTATTAGTTTAGGTCTTCTGCCTGTTAAATTATCTTTGAAAACGACAGGCTGTGGAATAAAGGAGTCTGGCTTTGCTGATGAAGAGGTTGGAGACATGGAAAATAGCAGACTTTGCAAACTTCGATGCTTCCCACCTGTAGCACTTGCTTGGGATAGCACATCTGGCCTTCACGTATTTCCAAATTTATACTCTGAAACCATTGAGGTGGATTCCTCACCAGCACTTTGGAGTTCAACGCAGGGATCAGAAAAAACCACTGTTCTCTTACTGGTGGACCCGCATTGTTCTTATACAACTAGTGTTGCTGTCTCTTTCACTGCTGCCGCCCGTAGATTTTTACTTTTGTATTGTTCACAGATTGTTGGATTCTCCTTTGCTGTTATCTTTTTTGCTCTGATGAGGCAAGCAAATGCATGGGAGCTTGATCTTCCTATACCTTCAGTGCTCTCGGCTGTAGTGTATAATTTGAGAATGCCGTTGACTTTTCTTGTAATGGCCATTGTACCTATTATGACTGCCTTGTTGTATTCCTTCTTGAGTTCTCAACCAATTCCTCCAGTCATTAGCTTCTTTGTCATCTCGGTTGCAATGGGAAAGGAATTCTTTCTTTTCCTTTTTTCATTGGTTCCTCAATCTCTCGTCCAGCTTTTCGTCATTGAAGCTTTGGGTCTATTCATATTGCTGTTGTCTCATGCGTTGTGCTGTCACAATGCACTGTCCAGCCATGCTCTAAGTGAGGGCTTATTTGATTTTGGAAGTGGAAGCGATAGCAGCTCTGAGCAGTTAAGATTCAACAGCAGTGGTAGAATCAGTAAGGGTGGTATCCTTGTGAATGAGCATCATAGTAGTAGTTCTCAAAGCCCAGATTTTGCACAAAGCTATGGCGAAACACAATTAGAGATCTTTCACCACCGGCATGGATTGCTGATTTTGCATCTTCTTGCAGCATTAATGTTTGGCCCCTCGTTTGTCGCTTGGTTGCAGAGAATCGGCATGGGGCACAGTTTCCCGTGGTTCTGGGACTCGATACTCTGCATCGGCGTCATTCTTCACGGTATCTGTGATTCAAAGCCCGAATTCAACTTCTTCTTGTTTCCCATTTCAAGCATTAGAGGTTGGGAAGCTAGGCTTAGCTTTGCCTATTTGGTTGCTGGATATTGTTCCCATCTCTCCGGCTTGGCCTTGGCTCCTTACAGAGCTTTCTATGCCATGGCCGCCATTGGGTTTATCTCATTCGTTTTCAGGATTCTAGAGAGAAGGAATAGAGAGAGAGGAGAAGCGTATCATAGCAGCCGAAAGCATTCTCACCGACACTGA

Network for GWHGAAZE012736

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07819.14	PGAP1	81	354	3.80E-86

Protein Sequence

>GWHPAAZE012743
MMQSFKSKIRVAALVVTCIGIALAAAYSMLKPISNGCNMTYMYPTYIPISSGANLSTAKYGLYLYHEGWRKIDFNEHLKKLSGIPMLFIPGNGGSYKQVRSLAAESDRAYQGGPLERMFYQEASLTVEEGVNMDFADLPIPNQYTCMLDWFAVDLEGEHSAMDGRILEEHTEYVVYAINRILDLYKESHETRVREGAAGSGNLPKSVILVGHSMGGFVARAAIVHPHLRKSTVETVLTLSAPHQSPPVALQPSLGHYYAHVNKEWRKGYEVQTSRTGRYMSSPLLSNVVVVSISGGINDYQVRAKLESLDGIVPPTHGFMISSSGMKNVWLSMEHQVILWCNQLVVQVSHTLLSLTDPETGRPYSEGRKRLAIFAKMLRSGMPENWLKLSHLSRQLPQVPSRIRNMNAGSQVNTISACPSSVHWSDDGLERDLYIETATVTVLAMDGRRRWLDIKKLGSNGKNHFIFVTNLIPCYGVRLHLWPEKGLSDSDMSASKKVLEVTLKMVQIPSGPAPRQIEPGSQTEQASPSAVFWLDSEDMRGYRFLTISVAPSPAISGRPPPAASMAVGQFFNPDEGKRELSPHSLLLSMYSQMDMILKEDHPLALNMLFTISLGLLPVKLSLKTTGCGIKESGFADEEVGDMENSRLCKLRCFPPVALAWDSTSGLHVFPNLYSETIEVDSSPALWSSTQGSEKTTVLLLVDPHCSYTTSVAVSFTAAARRFLLLYCSQIVGFSFAVIFFALMRQANAWELDLPIPSVLSAVVYNLRMPLTFLVMAIVPIMTALLYSFLSSQPIPPVISFFVISVAMGKEFFLFLFSLVPQSLVQLFVIEALGLFILLLSHALCCHNALSSHALSEGLFDFGSGSDSSSEQLRFNSSGRISKGGILVNEHHSSSSQSPDFAQSYGETQLEIFHHRHGLLILHLLAALMFGPSFVAWLQRIGMGHSFPWFWDSILCIGVILHGICDSKPEFNFFLFPISSIRGWEARLSFAYLVAGYCSHLSGLALAPYRAFYAMAAIGFISFVFRILERRNRERGEAYHSSRKHSHRH

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05294	PGAP1	Metabolic pathways	map01100
K05294	PGAP1	Glycosylphosphatidylinositol	map00563

Gene Ontology

GO term	Ontology	Name
GO:0016788	molecular_function	hydrolase activity, acting on ester bonds

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	31.505
	SRR3591706	second leaf	16.304
	SRR3591707	mature leaf	12.724
	SRR3591708	Shoot apex	25.598
	SRR3591709	Stem	32.690
	SRR3591710	White floral bud	18.650
	SRR3591711	White flower	20.745
	SRR3591712	Green floral bud	20.426
	SRR3591713	Yellow flower	12.320
SRP173429	SRR8316895	Juvenile bud stage	21.301
	SRR8316896	Juvenile bud stage	23.508
	SRR8316897	Juvenile bud stage	12.721
	SRR8316894	Third green stage	9.908
	SRR8316900	Third green stage	21.985
	SRR8316901	Third green stage	21.962
	SRR8316898	Complete white stage	5.484
	SRR8316899	Complete white stage	24.061
	SRR8316903	Complete white stage	13.842
	SRR8316902	Silver flowering stage	7.034
	SRR8316904	Silver flowering stage	11.608
	SRR8316905	Silver flowering stage	4.438
	SRR8316906	Gold flowering stage	12.408
	SRR8316907	Gold flowering stage	11.105
	SRR8316908	Gold flowering stage	13.002
SRP132670	SRR6706286	Control	14.615
	SRR6706287	Light intensity 50%	16.307
	SRR6706288	Light intensity 20%	18.297
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	14.948
	CNS0095593	Slightly white alabastrum(diploid) 2	13.854
	CNS0095594	Slightly white alabastrum(diploid) 3	12.299
	CNS0095595	Whole white alabastrum(diploid) 2	12.549
	CNS0095596	Whole white alabastrum(diploid) 3	10.802
	CNS0095597	Whole white alabastrum(diploid) 4	12.263
	CNS0095598	Silvery flower (diploied) 1	21.523
	CNS0095599	Silvery flower (diploied) 2	17.152
	CNS0095600	Silvery flower (diploied) 3	22.283
	CNS0095601	Golden flower (diploid) 1	15.724
	CNS0095602	Golden flower (diploid) 2	22.428
	CNS0095603	Golden flower (diploid) 3	21.418
	CNS0095604	Slightly white alabastrum(tetraploid) 1	18.978
	CNS0095605	Slightly white alabastrum(tetraploid) 2	15.981
	CNS0095606	Slightly white alabastrum(tetraploid) 3	38.332
	CNS0095607	Whole white alabastrum(tetraploid) 1	12.706
	CNS0095608	Whole white alabastrum(tetraploid) 2	9.258
	CNS0095609	Whole white alabastrum(tetraploid) 3	20.749
	CNS0095610	Silvery flower (tetraploid) 1	22.386
	CNS0095611	Silvery flower (tetraploid) 2	27.498
	CNS0095612	Silvery flower (tetraploid) 3	33.398
	CNS0095613	Golden flower (tetraploid) 1	10.390
	CNS0095614	Golden flower (tetraploid) 2	16.756
	CNS0095615	Golden flower (tetraploid) 3	11.745
CRA001975	CRR073297	Stem 1	21.437
	CRR073298	Stem 2	19.012
	CRR073299	Stem 3	15.175
	CRR073300	Leaf 1	20.055
	CRR073301	Leaf 2	17.774
	CRR073302	Leaf 3	11.738
	CRR073303	Juvenile bud 1	13.817
	CRR073304	Juvenile bud 2	6.615
	CRR073305	Juvenile bud 3	14.595
	CRR073306	Third green 1	4.750
	CRR073307	Third green 2	3.656
	CRR073308	Third green 3	6.099
	CRR073309	Second white 1	4.810
	CRR073310	Second white 2	5.658
	CRR073311	Second white 3	6.524
	CRR073312	Silver flowering 1	4.453
	CRR073313	Silver flowering 2	4.400
	CRR073314	Silver flowering 3	2.971
	CRR073315	Gold flowering 1	3.061
	CRR073316	Gold flowering 2	6.114
	CRR073317	Gold flowering 3	4.210
	CRR073318	Tawny withering 1	15.905
	CRR073319	Tawny withering 2	15.702
	CRR073320	Tawny withering 3	19.599