Detail information of GWHGAAZE012709


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009798397.16.82588E-62PREDICTED: cytochrome b5 isoform A-like [Nicotiana sylvestris]
Swissprottr|Q42342|CYB5E_ARATH9E-55Cytochrome b5 isoform E {ECO:0000303|PubMed:19054355}
trEMBLtr|I1KAY1|I1KAY1_SOYBN3E-61Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G13840.4}
TAIR10AT5G53560.12E-43cytochrome B5 isoform E

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene9017130790172161+
GWHAAZE00000003mRNA9017130790172161+
GWHAAZE00000003exon9017130790171352+
GWHAAZE00000003exon9017191190172161+
GWHAAZE00000003CDS9017130790171352+
GWHAAZE00000003CDS9017191190172161+
Transcript Sequence

Network for GWHGAAZE012709

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00173.29Cyt-b51441.20E-11
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf200.519
SRR3591706second leaf73.380
SRR3591707mature leaf30.707
SRR3591708Shoot apex166.340
SRR3591709Stem132.150
SRR3591710White floral bud199.199
SRR3591711White flower142.256
SRR3591712Green floral bud219.096
SRR3591713Yellow flower134.206
SRP173429 SRR8316895Juvenile bud stage 100.732
SRR8316896Juvenile bud stage 132.103
SRR8316897Juvenile bud stage 64.266
SRR8316894Third green stage 60.699
SRR8316900Third green stage 183.299
SRR8316901Third green stage 164.170
SRR8316898Complete white stage 72.023
SRR8316899Complete white stage 169.116
SRR8316903Complete white stage 117.791
SRR8316902Silver flowering stage37.111
SRR8316904Silver flowering stage52.118
SRR8316905Silver flowering stage32.307
SRR8316906Gold flowering stage 81.035
SRR8316907Gold flowering stage 73.358
SRR8316908Gold flowering stage 108.938
SRP132670SRR6706286Control210.726
SRR6706287Light intensity 50%209.233
SRR6706288Light intensity 20%226.266
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1174.482
CNS0095593Slightly white alabastrum(diploid) 2166.880
CNS0095594Slightly white alabastrum(diploid) 3136.198
CNS0095595Whole white alabastrum(diploid) 2140.711
CNS0095596Whole white alabastrum(diploid) 3131.538
CNS0095597Whole white alabastrum(diploid) 4112.684
CNS0095598Silvery flower (diploied) 186.636
CNS0095599Silvery flower (diploied) 286.583
CNS0095600Silvery flower (diploied) 399.898
CNS0095601Golden flower (diploid) 185.292
CNS0095602Golden flower (diploid) 280.183
CNS0095603Golden flower (diploid) 381.505
CNS0095604Slightly white alabastrum(tetraploid) 1132.795
CNS0095605Slightly white alabastrum(tetraploid) 2123.726
CNS0095606Slightly white alabastrum(tetraploid) 3168.699
CNS0095607Whole white alabastrum(tetraploid) 173.853
CNS0095608Whole white alabastrum(tetraploid) 274.076
CNS0095609Whole white alabastrum(tetraploid) 3126.086
CNS0095610Silvery flower (tetraploid) 197.699
CNS0095611Silvery flower (tetraploid) 289.006
CNS0095612Silvery flower (tetraploid) 396.948
CNS0095613Golden flower (tetraploid) 167.837
CNS0095614Golden flower (tetraploid) 296.593
CNS0095615Golden flower (tetraploid) 338.119
CRA001975CRR073297Stem 1312.737
CRR073298Stem 2301.226
CRR073299Stem 3349.926
CRR073300Leaf 1310.823
CRR073301Leaf 2346.903
CRR073302Leaf 3374.628
CRR073303Juvenile bud 1333.523
CRR073304Juvenile bud 2349.692
CRR073305Juvenile bud 3324.524
CRR073306Third green 1169.247
CRR073307Third green 2193.481
CRR073308Third green 3186.855
CRR073309Second white 1112.455
CRR073310Second white 274.417
CRR073311Second white 345.425
CRR073312Silver flowering 165.739
CRR073313Silver flowering 287.194
CRR073314Silver flowering 361.095
CRR073315Gold flowering 198.266
CRR073316Gold flowering 2119.338
CRR073317Gold flowering 394.839
CRR073318Tawny withering 1370.320
CRR073319Tawny withering 2277.322
CRR073320Tawny withering 3396.411