Detail information of GWHGAAZE012390


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010103622.10Dihydroorotate dehydrogenase (quinone) [Morus notabilis]
Swissprottr|P32746|PYRD_ARATH0Dihydroorotate dehydrogenase (quinone), mitochondrial (Precursor)
trEMBLtr|W9SAT0|W9SAT0_9ROSA0Dihydroorotate dehydrogenase (quinone), mitochondrial {ECO:0000256|RuleBase:RU361255}
TAIR10AT5G23300.10pyrimidine d

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene8474113184746433-
GWHAAZE00000003mRNA8474113184746433-
GWHAAZE00000003exon8474113184741205-
GWHAAZE00000003exon8474183084741929-
GWHAAZE00000003exon8474203784742074-
GWHAAZE00000003exon8474310184743238-
GWHAAZE00000003exon8474377884743807-
GWHAAZE00000003exon8474389184743998-
GWHAAZE00000003exon8474436584744445-
GWHAAZE00000003exon8474524284745497-
GWHAAZE00000003exon8474608484746433-
GWHAAZE00000003CDS8474608484746433-
GWHAAZE00000003CDS8474524284745497-
GWHAAZE00000003CDS8474436584744445-
GWHAAZE00000003CDS8474389184743998-
GWHAAZE00000003CDS8474377884743807-
GWHAAZE00000003CDS8474310184743238-
GWHAAZE00000003CDS8474203784742074-
GWHAAZE00000003CDS8474183084741929-
GWHAAZE00000003CDS8474113184741205-
Transcript Sequence

Network for GWHGAAZE012390

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01180.22DHO_dh563746.70E-97
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00254DHODH, pyrD Metabolic pathways map01100
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
GO:0055114biological_processoxidation-reduction process
GO:0016020cellular_componentmembrane
GO:0005737cellular_componentcytoplasm
GO:0004152molecular_functiondihydroorotate dehydrogenase activity
GO:0003824molecular_functioncatalytic activity
GO:0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.729
SRR3591706second leaf3.606
SRR3591707mature leaf4.141
SRR3591708Shoot apex11.126
SRR3591709Stem8.028
SRR3591710White floral bud20.825
SRR3591711White flower15.223
SRR3591712Green floral bud9.683
SRR3591713Yellow flower10.785
SRP173429 SRR8316895Juvenile bud stage 12.328
SRR8316896Juvenile bud stage 18.457
SRR8316897Juvenile bud stage 6.484
SRR8316894Third green stage 5.671
SRR8316900Third green stage 13.001
SRR8316901Third green stage 13.547
SRR8316898Complete white stage 2.583
SRR8316899Complete white stage 11.011
SRR8316903Complete white stage 5.543
SRR8316902Silver flowering stage9.241
SRR8316904Silver flowering stage10.889
SRR8316905Silver flowering stage4.246
SRR8316906Gold flowering stage 23.828
SRR8316907Gold flowering stage 24.496
SRR8316908Gold flowering stage 22.492
SRP132670SRR6706286Control6.243
SRR6706287Light intensity 50%8.831
SRR6706288Light intensity 20%7.493
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.269
CNS0095593Slightly white alabastrum(diploid) 28.821
CNS0095594Slightly white alabastrum(diploid) 315.966
CNS0095595Whole white alabastrum(diploid) 28.485
CNS0095596Whole white alabastrum(diploid) 37.262
CNS0095597Whole white alabastrum(diploid) 47.958
CNS0095598Silvery flower (diploied) 19.357
CNS0095599Silvery flower (diploied) 29.254
CNS0095600Silvery flower (diploied) 39.862
CNS0095601Golden flower (diploid) 17.303
CNS0095602Golden flower (diploid) 28.903
CNS0095603Golden flower (diploid) 38.600
CNS0095604Slightly white alabastrum(tetraploid) 17.902
CNS0095605Slightly white alabastrum(tetraploid) 27.308
CNS0095606Slightly white alabastrum(tetraploid) 312.672
CNS0095607Whole white alabastrum(tetraploid) 15.002
CNS0095608Whole white alabastrum(tetraploid) 23.494
CNS0095609Whole white alabastrum(tetraploid) 39.653
CNS0095610Silvery flower (tetraploid) 113.758
CNS0095611Silvery flower (tetraploid) 28.927
CNS0095612Silvery flower (tetraploid) 311.573
CNS0095613Golden flower (tetraploid) 16.400
CNS0095614Golden flower (tetraploid) 28.266
CNS0095615Golden flower (tetraploid) 311.535
CRA001975CRR073297Stem 19.934
CRR073298Stem 27.995
CRR073299Stem 310.495
CRR073300Leaf 19.453
CRR073301Leaf 29.737
CRR073302Leaf 38.033
CRR073303Juvenile bud 18.748
CRR073304Juvenile bud 26.119
CRR073305Juvenile bud 38.274
CRR073306Third green 14.859
CRR073307Third green 25.673
CRR073308Third green 36.372
CRR073309Second white 16.061
CRR073310Second white 26.766
CRR073311Second white 37.153
CRR073312Silver flowering 18.546
CRR073313Silver flowering 211.433
CRR073314Silver flowering 35.880
CRR073315Gold flowering 110.535
CRR073316Gold flowering 29.235
CRR073317Gold flowering 33.571
CRR073318Tawny withering 17.591
CRR073319Tawny withering 29.395
CRR073320Tawny withering 310.774