Detail information of GWHGAAZE011697


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009590084.14.0454E-102PREDICTED: nuclear transcription factor Y subunit C-9-like isoform X2 [Nicotiana tomentosiformis]
Swissprottr|Q8L4B2|NFYC9_ARATH2E-80Nuclear transcription factor Y subunit C-9
trEMBLtr|M1AHZ1|M1AHZ1_SOLTU2E-102Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400023210}
TAIR10AT1G08970.42E-64nuclear factor Y, subunit C9

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene7161032971610940-
GWHAAZE00000003mRNA7161032971610940-
GWHAAZE00000003exon7161032971610940-
GWHAAZE00000003CDS7161032971610940-
Transcript Sequence

Network for GWHGAAZE011697

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00808.24CBFD_NFYB_HMF36993.60E-18
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNF-YC

KEGG pathway

KO Enzyme pathway mapID
K08066NFYC, HAP5 Antigen processing and presentation map04612

Gene Ontology

GO term OntologyName
GO:0046982molecular_functionprotein heterodimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf71.039
SRR3591706second leaf30.712
SRR3591707mature leaf35.693
SRR3591708Shoot apex59.692
SRR3591709Stem81.724
SRR3591710White floral bud402.752
SRR3591711White flower401.291
SRR3591712Green floral bud69.592
SRR3591713Yellow flower270.211
SRP173429 SRR8316895Juvenile bud stage 28.121
SRR8316896Juvenile bud stage 40.530
SRR8316897Juvenile bud stage 15.785
SRR8316894Third green stage 14.916
SRR8316900Third green stage 49.590
SRR8316901Third green stage 51.224
SRR8316898Complete white stage 146.364
SRR8316899Complete white stage 80.119
SRR8316903Complete white stage 197.929
SRR8316902Silver flowering stage174.492
SRR8316904Silver flowering stage242.300
SRR8316905Silver flowering stage143.779
SRR8316906Gold flowering stage 249.403
SRR8316907Gold flowering stage 318.569
SRR8316908Gold flowering stage 232.045
SRP132670SRR6706286Control51.299
SRR6706287Light intensity 50%56.494
SRR6706288Light intensity 20%52.691
CNP0000432CNS0095592Slightly white alabastrum(diploid) 134.708
CNS0095593Slightly white alabastrum(diploid) 240.616
CNS0095594Slightly white alabastrum(diploid) 334.242
CNS0095595Whole white alabastrum(diploid) 228.663
CNS0095596Whole white alabastrum(diploid) 328.574
CNS0095597Whole white alabastrum(diploid) 431.277
CNS0095598Silvery flower (diploied) 196.461
CNS0095599Silvery flower (diploied) 2114.556
CNS0095600Silvery flower (diploied) 3268.320
CNS0095601Golden flower (diploid) 167.150
CNS0095602Golden flower (diploid) 2140.994
CNS0095603Golden flower (diploid) 3134.952
CNS0095604Slightly white alabastrum(tetraploid) 136.999
CNS0095605Slightly white alabastrum(tetraploid) 229.417
CNS0095606Slightly white alabastrum(tetraploid) 348.761
CNS0095607Whole white alabastrum(tetraploid) 125.901
CNS0095608Whole white alabastrum(tetraploid) 217.292
CNS0095609Whole white alabastrum(tetraploid) 334.014
CNS0095610Silvery flower (tetraploid) 1161.070
CNS0095611Silvery flower (tetraploid) 2181.873
CNS0095612Silvery flower (tetraploid) 3453.718
CNS0095613Golden flower (tetraploid) 1166.726
CNS0095614Golden flower (tetraploid) 2121.954
CNS0095615Golden flower (tetraploid) 3119.120
CRA001975CRR073297Stem 158.413
CRR073298Stem 254.180
CRR073299Stem 369.098
CRR073300Leaf 162.544
CRR073301Leaf 262.089
CRR073302Leaf 367.521
CRR073303Juvenile bud 165.512
CRR073304Juvenile bud 294.563
CRR073305Juvenile bud 371.317
CRR073306Third green 1515.517
CRR073307Third green 2579.390
CRR073308Third green 3460.834
CRR073309Second white 1676.195
CRR073310Second white 2458.664
CRR073311Second white 3363.020
CRR073312Silver flowering 1480.123
CRR073313Silver flowering 2611.430
CRR073314Silver flowering 3513.964
CRR073315Gold flowering 126.599
CRR073316Gold flowering 234.080
CRR073317Gold flowering 331.306
CRR073318Tawny withering 167.787
CRR073319Tawny withering 266.742
CRR073320Tawny withering 375.993