Detail information of GWHGAAZE011335


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006489792.10PREDICTED: ubiquinone biosynthesis monooxygenase COQ6-like isoform X2 [Citrus sinensis]
trEMBLtr|V4S0S2|V4S0S2_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR33852.1}
TAIR10AT3G24200.13E-141FAD/NAD(P)-binding oxidoreductase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene5796177857966910-
GWHAAZE00000003mRNA5796177857966910-
GWHAAZE00000003exon5796177857962671-
GWHAAZE00000003exon5796389857963936-
GWHAAZE00000003exon5796456757964740-
GWHAAZE00000003exon5796623757966288-
GWHAAZE00000003exon5796637757966444-
GWHAAZE00000003exon5796683057966910-
GWHAAZE00000003CDS5796683057966910-
GWHAAZE00000003CDS5796637757966444-
GWHAAZE00000003CDS5796623757966288-
GWHAAZE00000003CDS5796456757964740-
GWHAAZE00000003CDS5796389857963936-
GWHAAZE00000003CDS5796177857962671-
Transcript Sequence

Network for GWHGAAZE011335

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01494.20FAD_binding_32773272.90E-10
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06126COQ6 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0006744biological_processubiquinone biosynthetic process
GO:0016709molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0050660molecular_functionflavin adenine dinucleotide binding
GO:0071949molecular_functionFAD binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.160
SRR3591706second leaf3.164
SRR3591707mature leaf2.820
SRR3591708Shoot apex3.561
SRR3591709Stem2.730
SRR3591710White floral bud2.536
SRR3591711White flower2.053
SRR3591712Green floral bud2.468
SRR3591713Yellow flower1.252
SRP173429 SRR8316895Juvenile bud stage 1.372
SRR8316896Juvenile bud stage 1.505
SRR8316897Juvenile bud stage 0.954
SRR8316894Third green stage 0.638
SRR8316900Third green stage 0.751
SRR8316901Third green stage 1.481
SRR8316898Complete white stage 0.390
SRR8316899Complete white stage 0.935
SRR8316903Complete white stage 0.742
SRR8316902Silver flowering stage0.383
SRR8316904Silver flowering stage0.395
SRR8316905Silver flowering stage0.366
SRR8316906Gold flowering stage 0.297
SRR8316907Gold flowering stage 0.428
SRR8316908Gold flowering stage 0.200
SRP132670SRR6706286Control0.249
SRR6706287Light intensity 50%0.247
SRR6706288Light intensity 20%0.424
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.091
CNS0095593Slightly white alabastrum(diploid) 20.982
CNS0095594Slightly white alabastrum(diploid) 30.633
CNS0095595Whole white alabastrum(diploid) 21.136
CNS0095596Whole white alabastrum(diploid) 30.158
CNS0095597Whole white alabastrum(diploid) 41.161
CNS0095598Silvery flower (diploied) 10.927
CNS0095599Silvery flower (diploied) 20.945
CNS0095600Silvery flower (diploied) 30.355
CNS0095601Golden flower (diploid) 10.546
CNS0095602Golden flower (diploid) 20.052
CNS0095603Golden flower (diploid) 30.466
CNS0095604Slightly white alabastrum(tetraploid) 10.531
CNS0095605Slightly white alabastrum(tetraploid) 20.432
CNS0095606Slightly white alabastrum(tetraploid) 31.075
CNS0095607Whole white alabastrum(tetraploid) 10.714
CNS0095608Whole white alabastrum(tetraploid) 20.414
CNS0095609Whole white alabastrum(tetraploid) 30.442
CNS0095610Silvery flower (tetraploid) 10.766
CNS0095611Silvery flower (tetraploid) 20.643
CNS0095612Silvery flower (tetraploid) 30.178
CNS0095613Golden flower (tetraploid) 10.405
CNS0095614Golden flower (tetraploid) 20.340
CNS0095615Golden flower (tetraploid) 30.047
CRA001975CRR073297Stem 10.476
CRR073298Stem 20.885
CRR073299Stem 30.447
CRR073300Leaf 10.658
CRR073301Leaf 21.265
CRR073302Leaf 30.192
CRR073303Juvenile bud 10.174
CRR073304Juvenile bud 20.002
CRR073305Juvenile bud 30.082
CRR073306Third green 10.041
CRR073307Third green 20.000
CRR073308Third green 30.021
CRR073309Second white 10.238
CRR073310Second white 20.107
CRR073311Second white 30.027
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.030
CRR073314Silver flowering 30.015
CRR073315Gold flowering 10.225
CRR073316Gold flowering 20.200
CRR073317Gold flowering 30.223
CRR073318Tawny withering 10.071
CRR073319Tawny withering 20.178
CRR073320Tawny withering 30.138