Detail information of GWHGAAZE011299


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010657061.10PREDICTED: shaggy-related protein kinase eta-like [Vitis vinifera]
Swissprottr|Q39010|KSG6_ARATH0Shaggy-related protein kinase zeta
trEMBLtr|W9RWL2|W9RWL2_9ROSA0Shaggy-related protein kinase zeta {ECO:0000313|EMBL:EXC00262.1}
TAIR10AT2G30980.12E-160SHAGGY-related protein kinase dZeta

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene5585058755856122-
GWHAAZE00000003mRNA5585058755856122-
GWHAAZE00000003exon5585058755850679-
GWHAAZE00000003exon5585107155851154-
GWHAAZE00000003exon5585172555851818-
GWHAAZE00000003exon5585191055851933-
GWHAAZE00000003exon5585203255852207-
GWHAAZE00000003exon5585344755853503-
GWHAAZE00000003exon5585358555853650-
GWHAAZE00000003exon5585373955854011-
GWHAAZE00000003exon5585409655854155-
GWHAAZE00000003exon5585443755854529-
GWHAAZE00000003exon5585599655856122-
GWHAAZE00000003five_prime_UTR5585608955856122-
GWHAAZE00000003CDS5585599655856088-
GWHAAZE00000003CDS5585443755854529-
GWHAAZE00000003CDS5585409655854155-
GWHAAZE00000003CDS5585373955854011-
GWHAAZE00000003CDS5585358555853650-
GWHAAZE00000003CDS5585344755853503-
GWHAAZE00000003CDS5585203255852207-
GWHAAZE00000003CDS5585191055851933-
GWHAAZE00000003CDS5585172555851818-
GWHAAZE00000003CDS5585107155851154-
GWHAAZE00000003CDS5585058755850679-
Transcript Sequence

Network for GWHGAAZE011299

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase663495.00E-51
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_GSK

KEGG pathway

KO Enzyme pathway mapID
K14502BIN2 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.040
SRR3591706second leaf7.288
SRR3591707mature leaf5.722
SRR3591708Shoot apex13.111
SRR3591709Stem15.165
SRR3591710White floral bud6.919
SRR3591711White flower9.132
SRR3591712Green floral bud14.877
SRR3591713Yellow flower5.808
SRP173429 SRR8316895Juvenile bud stage 4.043
SRR8316896Juvenile bud stage 5.898
SRR8316897Juvenile bud stage 3.628
SRR8316894Third green stage 3.419
SRR8316900Third green stage 10.486
SRR8316901Third green stage 7.340
SRR8316898Complete white stage 2.524
SRR8316899Complete white stage 13.200
SRR8316903Complete white stage 2.733
SRR8316902Silver flowering stage1.770
SRR8316904Silver flowering stage1.743
SRR8316905Silver flowering stage0.475
SRR8316906Gold flowering stage 3.766
SRR8316907Gold flowering stage 3.041
SRR8316908Gold flowering stage 4.109
SRP132670SRR6706286Control15.723
SRR6706287Light intensity 50%14.544
SRR6706288Light intensity 20%12.932
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.050
CNS0095593Slightly white alabastrum(diploid) 22.516
CNS0095594Slightly white alabastrum(diploid) 32.260
CNS0095595Whole white alabastrum(diploid) 21.649
CNS0095596Whole white alabastrum(diploid) 32.511
CNS0095597Whole white alabastrum(diploid) 43.233
CNS0095598Silvery flower (diploied) 13.272
CNS0095599Silvery flower (diploied) 23.180
CNS0095600Silvery flower (diploied) 35.581
CNS0095601Golden flower (diploid) 13.245
CNS0095602Golden flower (diploid) 26.493
CNS0095603Golden flower (diploid) 35.094
CNS0095604Slightly white alabastrum(tetraploid) 15.585
CNS0095605Slightly white alabastrum(tetraploid) 24.626
CNS0095606Slightly white alabastrum(tetraploid) 316.262
CNS0095607Whole white alabastrum(tetraploid) 13.587
CNS0095608Whole white alabastrum(tetraploid) 22.742
CNS0095609Whole white alabastrum(tetraploid) 39.468
CNS0095610Silvery flower (tetraploid) 16.118
CNS0095611Silvery flower (tetraploid) 26.337
CNS0095612Silvery flower (tetraploid) 33.250
CNS0095613Golden flower (tetraploid) 11.682
CNS0095614Golden flower (tetraploid) 25.087
CNS0095615Golden flower (tetraploid) 31.362
CRA001975CRR073297Stem 17.882
CRR073298Stem 27.796
CRR073299Stem 36.329
CRR073300Leaf 19.160
CRR073301Leaf 26.930
CRR073302Leaf 36.812
CRR073303Juvenile bud 18.235
CRR073304Juvenile bud 25.370
CRR073305Juvenile bud 39.814
CRR073306Third green 10.187
CRR073307Third green 20.948
CRR073308Third green 31.038
CRR073309Second white 11.975
CRR073310Second white 21.019
CRR073311Second white 30.324
CRR073312Silver flowering 10.121
CRR073313Silver flowering 20.072
CRR073314Silver flowering 30.476
CRR073315Gold flowering 13.266
CRR073316Gold flowering 22.820
CRR073317Gold flowering 34.551
CRR073318Tawny withering 16.082
CRR073319Tawny withering 22.784
CRR073320Tawny withering 36.915