Detail information of GWHGAAZE010021


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrYP_009091715.12.9384E-148orf214 (mitochondrion) [Panax ginseng]
Swissprottr|O05000|NU2M_ARATH1E-120NADH-ubiquinone oxidoreductase chain 2
trEMBLtr|A0A096XFD2|A0A096XFD2_PANGI1E-148Orf214 {ECO:0000313|EMBL:AHJ81037.1}
TAIR10AT2G07689.13E-115NADH-Ubiquinone/plastoquinone (complex I) protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene122129270122129914-
GWHAAZE00000002mRNA122129270122129914-
GWHAAZE00000002exon122129270122129914-
GWHAAZE00000002CDS122129270122129914-
Transcript Sequence

Network for GWHGAAZE010021

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00361.21Proton_antipo_M11892.20E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03879ND2 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.252
SRR3591706second leaf0.113
SRR3591707mature leaf0.241
SRR3591708Shoot apex0.895
SRR3591709Stem0.379
SRR3591710White floral bud0.416
SRR3591711White flower0.089
SRR3591712Green floral bud0.532
SRR3591713Yellow flower0.004
SRP173429 SRR8316895Juvenile bud stage 6.674
SRR8316896Juvenile bud stage 3.994
SRR8316897Juvenile bud stage 10.427
SRR8316894Third green stage 12.896
SRR8316900Third green stage 1.157
SRR8316901Third green stage 0.554
SRR8316898Complete white stage 4.491
SRR8316899Complete white stage 0.184
SRR8316903Complete white stage 6.709
SRR8316902Silver flowering stage6.940
SRR8316904Silver flowering stage9.095
SRR8316905Silver flowering stage4.924
SRR8316906Gold flowering stage 0.246
SRR8316907Gold flowering stage 0.760
SRR8316908Gold flowering stage 0.350
SRP132670SRR6706286Control0.706
SRR6706287Light intensity 50%0.758
SRR6706288Light intensity 20%0.486
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.608
CNS0095593Slightly white alabastrum(diploid) 24.096
CNS0095594Slightly white alabastrum(diploid) 37.386
CNS0095595Whole white alabastrum(diploid) 25.612
CNS0095596Whole white alabastrum(diploid) 34.967
CNS0095597Whole white alabastrum(diploid) 46.083
CNS0095598Silvery flower (diploied) 12.770
CNS0095599Silvery flower (diploied) 23.978
CNS0095600Silvery flower (diploied) 31.767
CNS0095601Golden flower (diploid) 14.721
CNS0095602Golden flower (diploid) 20.796
CNS0095603Golden flower (diploid) 31.896
CNS0095604Slightly white alabastrum(tetraploid) 13.158
CNS0095605Slightly white alabastrum(tetraploid) 23.342
CNS0095606Slightly white alabastrum(tetraploid) 31.006
CNS0095607Whole white alabastrum(tetraploid) 14.905
CNS0095608Whole white alabastrum(tetraploid) 23.902
CNS0095609Whole white alabastrum(tetraploid) 31.320
CNS0095610Silvery flower (tetraploid) 10.640
CNS0095611Silvery flower (tetraploid) 21.083
CNS0095612Silvery flower (tetraploid) 31.103
CNS0095613Golden flower (tetraploid) 14.546
CNS0095614Golden flower (tetraploid) 21.392
CNS0095615Golden flower (tetraploid) 30.790
CRA001975CRR073297Stem 10.703
CRR073298Stem 20.774
CRR073299Stem 30.068
CRR073300Leaf 10.491
CRR073301Leaf 20.433
CRR073302Leaf 30.292
CRR073303Juvenile bud 10.357
CRR073304Juvenile bud 20.549
CRR073305Juvenile bud 32.809
CRR073306Third green 10.437
CRR073307Third green 20.580
CRR073308Third green 30.920
CRR073309Second white 10.875
CRR073310Second white 21.795
CRR073311Second white 35.294
CRR073312Silver flowering 13.456
CRR073313Silver flowering 20.763
CRR073314Silver flowering 32.043
CRR073315Gold flowering 10.187
CRR073316Gold flowering 20.440
CRR073317Gold flowering 31.117
CRR073318Tawny withering 10.935
CRR073319Tawny withering 20.869
CRR073320Tawny withering 30.438