Detail information of GWHGAAZE009875


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009365718.14.64685E-90PREDICTED: glutathione S-transferase F13 [Pyrus x bretschneideri]
Swissprottr|Q9LZI9|GSTFD_ARATH4E-79Glutathione S-transferase F13
trEMBLtr|B9I9U0|B9I9U0_POPTR6E-90Phi class glutathione transferase GSTF3 {ECO:0000313|EMBL:ADB11382.1}
TAIR10AT3G62760.11E-63Glutathione S-transferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene119001482119002383+
GWHAAZE00000002mRNA119001482119002383+
GWHAAZE00000002exon119001482119001628+
GWHAAZE00000002exon119001753119001805+
GWHAAZE00000002exon119001993119002383+
GWHAAZE00000002CDS119001482119001628+
GWHAAZE00000002CDS119001753119001805+
GWHAAZE00000002CDS119001993119002383+
Transcript Sequence

Network for GWHGAAZE009875

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N1656.40E-13
PF00043.26GST_C931841.90E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.301
SRR3591706second leaf0.347
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.655
SRR3591709Stem0.000
SRR3591710White floral bud1.373
SRR3591711White flower1.299
SRR3591712Green floral bud52.845
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 54.986
SRR8316896Juvenile bud stage 183.826
SRR8316897Juvenile bud stage 94.435
SRR8316894Third green stage 70.599
SRR8316900Third green stage 196.687
SRR8316901Third green stage 263.316
SRR8316898Complete white stage 0.098
SRR8316899Complete white stage 2.432
SRR8316903Complete white stage 0.429
SRR8316902Silver flowering stage0.549
SRR8316904Silver flowering stage0.625
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.140
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control91.814
SRR6706287Light intensity 50%75.523
SRR6706288Light intensity 20%66.062
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1161.825
CNS0095593Slightly white alabastrum(diploid) 298.639
CNS0095594Slightly white alabastrum(diploid) 3214.584
CNS0095595Whole white alabastrum(diploid) 2134.152
CNS0095596Whole white alabastrum(diploid) 3181.489
CNS0095597Whole white alabastrum(diploid) 4109.806
CNS0095598Silvery flower (diploied) 10.654
CNS0095599Silvery flower (diploied) 21.080
CNS0095600Silvery flower (diploied) 30.242
CNS0095601Golden flower (diploid) 10.804
CNS0095602Golden flower (diploid) 20.278
CNS0095603Golden flower (diploid) 30.457
CNS0095604Slightly white alabastrum(tetraploid) 1220.112
CNS0095605Slightly white alabastrum(tetraploid) 2217.753
CNS0095606Slightly white alabastrum(tetraploid) 32.617
CNS0095607Whole white alabastrum(tetraploid) 1195.677
CNS0095608Whole white alabastrum(tetraploid) 2136.900
CNS0095609Whole white alabastrum(tetraploid) 3126.359
CNS0095610Silvery flower (tetraploid) 10.338
CNS0095611Silvery flower (tetraploid) 20.990
CNS0095612Silvery flower (tetraploid) 30.695
CNS0095613Golden flower (tetraploid) 10.697
CNS0095614Golden flower (tetraploid) 20.522
CNS0095615Golden flower (tetraploid) 30.401
CRA001975CRR073297Stem 150.088
CRR073298Stem 263.752
CRR073299Stem 337.064
CRR073300Leaf 156.378
CRR073301Leaf 261.629
CRR073302Leaf 371.650
CRR073303Juvenile bud 125.694
CRR073304Juvenile bud 226.928
CRR073305Juvenile bud 30.303
CRR073306Third green 10.803
CRR073307Third green 21.500
CRR073308Third green 30.826
CRR073309Second white 10.291
CRR073310Second white 20.216
CRR073311Second white 30.137
CRR073312Silver flowering 12.105
CRR073313Silver flowering 21.198
CRR073314Silver flowering 30.000
CRR073315Gold flowering 12.466
CRR073316Gold flowering 20.526
CRR073317Gold flowering 31.329
CRR073318Tawny withering 11.745
CRR073319Tawny withering 20.904
CRR073320Tawny withering 31.602