Detail information of GWHGAAZE009808


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrADY80558.11.649E-124adenylate isopentenyltransferase [Malus domestica]
Swissprottr|Q93WC9|IPT3_ARATH7E-108Adenylate isopentenyltransferase 3, chloroplastic (Precursor)
trEMBLtr|F6KQG7|F6KQG7_MALDO6E-125Adenylate isopentenyltransferase {ECO:0000313|EMBL:ADY80558.1}
TAIR10AT3G63110.18E-88isopentenyltransferase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene117628654117629499+
GWHAAZE00000002mRNA117628654117629499+
GWHAAZE00000002exon117628654117629499+
GWHAAZE00000002CDS117628654117629499+
Transcript Sequence

Network for GWHGAAZE009808

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01715.18IPPT301045.40E-23
PF01715.18IPPT1072052.70E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10760IPT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Zeatin biosynthesismap00908

Gene Ontology

GO term OntologyName
GO:0008033biological_processtRNA processing

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.541
SRR3591706second leaf1.064
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.894
SRR3591709Stem2.092
SRR3591710White floral bud0.205
SRR3591711White flower0.000
SRR3591712Green floral bud0.258
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.043
SRR8316896Juvenile bud stage 0.000
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.087
SRR8316900Third green stage 0.202
SRR8316901Third green stage 0.049
SRR8316898Complete white stage 0.170
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.098
SRR8316902Silver flowering stage0.052
SRR8316904Silver flowering stage0.310
SRR8316905Silver flowering stage0.125
SRR8316906Gold flowering stage 0.361
SRR8316907Gold flowering stage 0.029
SRR8316908Gold flowering stage 0.098
SRP132670SRR6706286Control0.047
SRR6706287Light intensity 50%0.027
SRR6706288Light intensity 20%0.096
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.176
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.287
CNS0095595Whole white alabastrum(diploid) 20.082
CNS0095596Whole white alabastrum(diploid) 30.147
CNS0095597Whole white alabastrum(diploid) 40.141
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.193
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.160
CNS0095603Golden flower (diploid) 30.089
CNS0095604Slightly white alabastrum(tetraploid) 10.350
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.272
CNS0095608Whole white alabastrum(tetraploid) 20.214
CNS0095609Whole white alabastrum(tetraploid) 30.112
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.041
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.111
CRR073298Stem 20.041
CRR073299Stem 30.000
CRR073300Leaf 10.227
CRR073301Leaf 20.129
CRR073302Leaf 30.159
CRR073303Juvenile bud 10.616
CRR073304Juvenile bud 20.186
CRR073305Juvenile bud 30.081
CRR073306Third green 10.153
CRR073307Third green 20.449
CRR073308Third green 30.564
CRR073309Second white 10.402
CRR073310Second white 20.015
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.055
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.996
CRR073317Gold flowering 30.120
CRR073318Tawny withering 11.677
CRR073319Tawny withering 22.059
CRR073320Tawny withering 30.861